SCOPe 2.08: Protein: Glucosaminidase GH84, catalytic domain

Lineage for Protein: Glucosaminidase GH84, catalytic domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 proteins)
Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain

Protein Glucosaminidase GH84, catalytic domain [141790] (1 species)

Species:

Bacteroides thetaiotaomicron [TaxId:818] [141791] (8 PDB entries)
Uniprot Q89ZI2 148-457
1. Domains for 2chn:
  1. Domain d2chna2: 2chn A:127-436 [130474]
    Other proteins in same PDB: d2chna1, d2chna3, d2chnb1, d2chnb3
    complexed with ca, gol, ngt
  2. Domain d2chnb2: 2chn B:127-436 [130477]
    Other proteins in same PDB: d2chna1, d2chna3, d2chnb1, d2chnb3
    automatically matched to 2CHN A:127-436
    complexed with ca, gol, ngt
2. Domains for 2cho:
  1. Domain d2choa2: 2cho A:127-436 [130480]
    Other proteins in same PDB: d2choa1, d2choa3, d2chob1, d2chob3
    automatically matched to 2CHN A:127-436
    complexed with act, ca, gol
  2. Domain d2chob2: 2cho B:127-436 [130483]
    Other proteins in same PDB: d2choa1, d2choa3, d2chob1, d2chob3
    automatically matched to 2CHN A:127-436
    complexed with act, ca, gol
3. Domain for 2j47:
  - Domain d2j47a2: 2j47 A:127-436 [137992]
    Other proteins in same PDB: d2j47a1, d2j47a3
    complexed with gdv, gol
4. Domains for 2j4g:
  1. Domain d2j4ga2: 2j4g A:127-436 [147877]
    Other proteins in same PDB: d2j4ga1, d2j4ga3, d2j4gb1, d2j4gb3
    complexed with act, gol, nb1
  2. Domain d2j4gb2: 2j4g B:127-436 [147880]
    Other proteins in same PDB: d2j4ga1, d2j4ga3, d2j4gb1, d2j4gb3
    automated match to d2j4ga2
    complexed with act, gol, nb1
5. Domains for 2vvn:
  1. Domain d2vvna2: 2vvn A:127-436 [153635]
    Other proteins in same PDB: d2vvna1, d2vvna3, d2vvnb1, d2vvnb3
    automatically matched to 2J4G A:127-436
    complexed with gol, nh4, nht
  2. Domain d2vvnb2: 2vvn B:127-436 [153638]
    Other proteins in same PDB: d2vvna1, d2vvna3, d2vvnb1, d2vvnb3
    automatically matched to 2J4G A:127-436
    complexed with gol, nh4, nht
6. Domain for 2w4x:
  - Domain d2w4xa2: 2w4x A:127-436 [206626]
    Other proteins in same PDB: d2w4xa1, d2w4xa3
    automated match to d2j47a2
    complexed with ca, gol, stz
7. Domain for 2w67:
  - Domain d2w67b2: 2w67 B:127-436 [206640]
    Other proteins in same PDB: d2w67b1, d2w67b3
    automated match to d2j47a2
    complexed with ca, f34, gol
8. Domain for 2wca:
  - Domain d2wcaa2: 2wca A:127-436 [206764]
    Other proteins in same PDB: d2wcaa1, d2wcaa3
    automated match to d2j47a2
    complexed with ca, np6

More info for Protein Glucosaminidase GH84, catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain

Timeline for Protein Glucosaminidase GH84, catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain:

Protein Glucosaminidase GH84, catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain first appeared in SCOP 1.73
Protein Glucosaminidase GH84, catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain appears in SCOPe 2.07