SCOPe 2.04: Protein: Peptidylarginine deiminase Pad4, middle domain

Lineage for Protein: Peptidylarginine deiminase Pad4, middle domain

Root: SCOPe 2.04
Class b: All beta proteins [48724] (176 folds)
Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
Superfamily b.2.9: Peptidylarginine deiminase Pad4, middle domain [110083] (1 family)
automatically mapped to Pfam PF08527
Family b.2.9.1: Peptidylarginine deiminase Pad4, middle domain [110084] (1 protein)
Protein Peptidylarginine deiminase Pad4, middle domain [110085] (1 species)

Species:

Human (Homo sapiens) [TaxId:9606] [110086] (12 PDB entries)
Uniprot Q9UM07
1. Domain for 1wd8:
  - Domain d1wd8a1: 1wd8 A:113-293 [109237]
    Other proteins in same PDB: d1wd8a2, d1wd8a3
2. Domain for 1wd9:
  - Domain d1wd9a1: 1wd9 A:113-293 [109240]
    Other proteins in same PDB: d1wd9a2, d1wd9a3
    complexed with ca, so4
3. Domain for 1wda:
  - Domain d1wdaa1: 1wda A:113-293 [109243]
    Other proteins in same PDB: d1wdaa2, d1wdaa3
    complexed with bag, ca, so4
4. Domain for 2dew:
  - Domain d2dewx1: 2dew X:113-293 [131433]
    Other proteins in same PDB: d2dewx2, d2dewx3
    automatically matched to d1wd8a1
    complexed with ca, so4
5. Domain for 2dex:
  - Domain d2dexx1: 2dex X:113-293 [131436]
    Other proteins in same PDB: d2dexx2, d2dexx3
    automatically matched to d1wd8a1
    complexed with ca, so4
6. Domain for 2dey:
  - Domain d2deyx1: 2dey X:113-293 [131439]
    Other proteins in same PDB: d2deyx2, d2deyx3
    automatically matched to d1wd8a1
    complexed with ca, so4
7. Domain for 2dw5:
  - Domain d2dw5a1: 2dw5 A:113-293 [131805]
    Other proteins in same PDB: d2dw5a2, d2dw5a3
    automated match to d2dexx1
    complexed with bfb, ca, so4
8. Domain for 3apm:
  - Domain d3apma2: 3apm A:113-293 [245185]
    Other proteins in same PDB: d3apma1, d3apma3
    automated match to d2dexx1
9. Domain for 3apn:
  - Domain d3apna2: 3apn A:113-293 [245188]
    Other proteins in same PDB: d3apna1, d3apna3
    automated match to d2dexx1
10. Domain for 3b1t:
  - Domain d3b1ta2: 3b1t A:113-293 [245354]
    Other proteins in same PDB: d3b1ta1, d3b1ta3
    automated match to d2dexx1
    complexed with ca, so4, ycl
11. Domain for 3b1u:
  - Domain d3b1ua2: 3b1u A:113-293 [245357]
    Other proteins in same PDB: d3b1ua1, d3b1ua3
    automated match to d2dexx1
    complexed with ca, so4, yff
12. Domain for 4dkt:
  - Domain d4dkta2: 4dkt A:113-293 [251475]
    Other proteins in same PDB: d4dkta1, d4dkta3
    automated match to d2dexx1
    complexed with ca, edo, so4

More info for Protein Peptidylarginine deiminase Pad4, middle domain from b.2.9.1: Peptidylarginine deiminase Pad4, middle domain

Timeline for Protein Peptidylarginine deiminase Pad4, middle domain from b.2.9.1: Peptidylarginine deiminase Pad4, middle domain:

Protein Peptidylarginine deiminase Pad4, middle domain from b.2.9.1: Peptidylarginine deiminase Pad4, middle domain first appeared in SCOP 1.69
Protein Peptidylarginine deiminase Pad4, middle domain from b.2.9.1: Peptidylarginine deiminase Pad4, middle domain appears in SCOPe 2.03
Protein Peptidylarginine deiminase Pad4, middle domain from b.2.9.1: Peptidylarginine deiminase Pad4, middle domain appears in SCOPe 2.05
Protein Peptidylarginine deiminase Pad4, middle domain from b.2.9.1: Peptidylarginine deiminase Pad4, middle domain appears in the current release, SCOPe 2.08