SCOPe 2.07: Domain d1wd8a1: 1wd8 A:113-293

Lineage for d1wd8a1 (1wd8 A:113-293)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.9: Peptidylarginine deiminase Pad4, middle domain [110083] (2 families)
   automatically mapped to Pfam PF08527

5. Family b.2.9.1: Peptidylarginine deiminase Pad4, middle domain [110084] (1 protein)

6. Protein Peptidylarginine deiminase Pad4, middle domain [110085] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [110086] (17 PDB entries)
   Uniprot Q9UM07

8. Domain d1wd8a1: 1wd8 A:113-293 [109237]
   Other proteins in same PDB: d1wd8a2, d1wd8a3

Details for d1wd8a1

PDB Entry: 1wd8, 2.8 Å

PDB Description: Calcium free form of human peptidylarginine deiminase type4 (PAD4)

PDB Compounds: (A:) Protein-arginine deiminase type IV

SCOPe Domain Sequences for d1wd8a1:

Sequence, based on SEQRES records:

>d1wd8a1 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkvkptravkdqrtwtwgpcgqgaillvncdrdnlessamdceddevl
dsedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfqatrgklsskcsvvlgpk
wpshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfr
v

Sequence, based on observed residues (ATOM records):

>d1wd8a1 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkvkqrtwtwgpcgqgaillvncdrdldsedlqdmslmtlstktpkdf
ftnhtlvlhvarsemdkvrvfqatrkcsvvlgpkwpshylmvpggkhnmdfyvealafpd
tdfpglitltislldtsnlelpeavvfqdsvvfrv

Timeline for d1wd8a1:

• d1wd8a1 first appeared in SCOP 1.69
  
• d1wd8a1 appears in SCOPe 2.06
  
• d1wd8a1 appears in the current release, SCOPe 2.08