SCOPe 2.07: Domain d1vgyb2: 1vgy B:181-293

Lineage for d1vgyb2 (1vgy B:181-293)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.19: Bacterial exopeptidase dimerisation domain [55031] (1 family)

5. Family d.58.19.1: Bacterial exopeptidase dimerisation domain [55032] (8 proteins)

6. Protein Succinyl-diaminopimelate desuccinylase [103005] (1 species)

7. Species Neisseria meningitidis [TaxId:487] [103006] (1 PDB entry)

8. Domain d1vgyb2: 1vgy B:181-293 [100623]
   Other proteins in same PDB: d1vgya1, d1vgyb1
   structural genomics

Details for d1vgyb2

PDB Entry: 1vgy, 1.9 Å

PDB Description: crystal structure of succinyl diaminopimelate desuccinylase

PDB Compounds: (B:) succinyl-diaminopimelate desuccinylase

SCOPe Domain Sequences for d1vgyb2:

Sequence; same for both SEQRES and ATOM records:

>d1vgyb2 d.58.19.1 (B:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]}
gslsgnltvkgkqghiayphlainpvhtfapalleltqevwdegneyfpptsfqisning
gtgatnvipgelnvkfnfrfstesteaglkqrvhaildkhgvqydlqwscsgq

Timeline for d1vgyb2:

• d1vgyb2 first appeared in SCOP 1.67
  
• d1vgyb2 appears in SCOPe 2.06
  
• d1vgyb2 appears in the current release, SCOPe 2.08