PDB entry 7kyy

View 7kyy on RCSB PDB site
Description: Crystal structure of Plasmodium falciparum dihydroorotate dehydrogenase bound with Inhibitor DSM697 (3-methyl-N-(1-(5-methylisoxazol-3-yl)ethyl)-4-(6-(trifluoromethyl)-1H-indol-3-yl)-1H-pyrrole-2-carboxamide)
Class: oxidoreductase/oxidoreductase inhibitor
Keywords: Alpha-Beta Barrel, OXIDOREDUCTASE, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR complex
Deposited on 2020-12-09, released 2021-05-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2021-05-19, with a file datestamp of 2021-05-14.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dihydroorotate dehydrogenase (quinone), mitochondrial
    Species: Plasmodium falciparum (isolate 3D7) [TaxId:36329]
    Gene: PFF0160c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08210 (19-End)
      • expression tag (17-18)
    Domains in SCOPe 2.07: d7kyya1, d7kyya2
  • Chain 'B':
    Compound: Dihydroorotate dehydrogenase (quinone), mitochondrial
    Species: Plasmodium falciparum (isolate 3D7) [TaxId:36329]
    Gene: PFF0160c
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Dihydroorotate dehydrogenase (quinone), mitochondrial
    Species: Plasmodium falciparum (isolate 3D7) [TaxId:36329]
    Gene: PFF0160c
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Dihydroorotate dehydrogenase (quinone), mitochondrial
    Species: Plasmodium falciparum (isolate 3D7) [TaxId:36329]
    Gene: PFF0160c
    Database cross-references and differences (RAF-indexed):
  • Heterogens: XCD, FMN, ORO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7kyyA (A:)
mghhhhhhaenlyfqgadpfesynpefflydiflkfclkyidgeichdlflllgkynilp
ydtsndsiyactnikhldfinpfgvaagfdkngvcidsilklgfsfieigtitprgqtgn
akprifrdvesrsiinscgfnnmgcdkvtenlilfrkrqeedkllskhivgvsigknkdt
vnivddlkycinkigryadyiainvsspntpglrdnqeagklkniilsvkeeidnleknn
imndeflwfnttkkkplvfvklapdlnqeqkkeiadvlletnidgmiisntttqindiks
fenkkggvsgaklkdistkficemynytnkqipiiasggifsgldalekieagasvcqly
sclvfngmksavqikrelnhllyqrgyynlkeaigrkhsks

    Sequence, based on observed residues (ATOM records): (download) 
    >7kyyA (A:)
dpfesynpefflydiflkfclkyidgeichdlflllgkynilpydtsndsiyactnikhl
dfinpfgvaagfdkngvcidsilklgfsfieigtitprgqtgnakprifrdvesrsiins
cgfnnmgcdkvtenlilfrkrqeedkllskhivgvsigknkdtvnivddlkycinkigry
adyiainvsspntpglrdnqeagklkniilsvkeeidnleknflwfnttkkkplvfvkla
pdlnqeqkkeiadvlletnidgmiisntttqindiksfenkkggvsgaklkdistkfice
mynytnkqipiiasggifsgldalekieagasvcqlysclvfngmksavqikrelnhlly
qrgyynlkeaigrkhs

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.