PDB entry 6t3t

View 6t3t on RCSB PDB site
Description: Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV
Class: lyase
Keywords: thermoacidophile, methanotrophy, lysine biosynthesis, lyase
Deposited on 2019-10-11, released 2020-05-06
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-05-06, with a file datestamp of 2020-05-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 4-hydroxy-tetrahydrodipicolinate synthase
    Species: Methylacidiphilum fumariolicum SolV [TaxId:1156937]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6t3ta_
  • Chain 'B':
    Compound: 4-hydroxy-tetrahydrodipicolinate synthase
    Species: Methylacidiphilum fumariolicum SolV [TaxId:1156937]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6t3tb_
  • Chain 'C':
    Compound: 4-hydroxy-tetrahydrodipicolinate synthase
    Species: Methylacidiphilum fumariolicum SolV [TaxId:1156937]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6t3tc_
  • Chain 'D':
    Compound: 4-hydroxy-tetrahydrodipicolinate synthase
    Species: Methylacidiphilum fumariolicum SolV [TaxId:1156937]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6t3td_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6t3tA (A:)
mkiqgtytaiispfhngqidrkalerllehqienridgivpvgttgesptlsyeehielv
rltaeivekrikifagtgsnstaeaihltkeaekigvdgvllvspyynrpsqeglfrhfs
aiaastslpillynipsrcgvdiavdtvkrlveknknivgikeaggsvdrvsqlvealpg
efsilsgddaltlpflsvgavgvvsvasnlfprpvsalvrlylegkpfearqlhqtlypl
frdlmietnpvpvktalamegltdlelrlplaplqpqnleklkttlsrtkeklakvehlw
a

    Sequence, based on observed residues (ATOM records): (download) 
    >6t3tA (A:)
kiqgtytaiispfhngqidrkalerllehqienridgivpvgttgesptlsyeehielvr
ltaeivekrikifagtgsnstaeaihltkeaekigvdgvllvspyynrpsqeglfrhfsa
iaastslpillynipsrcgvdiavdtvkrlveknknivgikeaggsvdrvsqlvealpge
fsilsgddaltlpflsvgavgvvsvasnlfprpvsalvrlylegkpfearqlhqtlyplf
rdlmietnpvpvktalamegltdlelrlplaplqpqnleklkttlsrtkeklakvehlwa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6t3tB (B:)
mkiqgtytaiispfhngqidrkalerllehqienridgivpvgttgesptlsyeehielv
rltaeivekrikifagtgsnstaeaihltkeaekigvdgvllvspyynrpsqeglfrhfs
aiaastslpillynipsrcgvdiavdtvkrlveknknivgikeaggsvdrvsqlvealpg
efsilsgddaltlpflsvgavgvvsvasnlfprpvsalvrlylegkpfearqlhqtlypl
frdlmietnpvpvktalamegltdlelrlplaplqpqnleklkttlsrtkeklakvehlw
a

    Sequence, based on observed residues (ATOM records): (download) 
    >6t3tB (B:)
kiqgtytaiispfhngqidrkalerllehqienridgivpvgttgesptlsyeehielvr
ltaeivekrikifagtgsnstaeaihltkeaekigvdgvllvspyynrpsqeglfrhfsa
iaastslpillynipsrcgvdiavdtvkrlveknknivgikeaggsvdrvsqlvealpge
fsilsgddaltlpflsvgavgvvsvasnlfprpvsalvrlylegkpfearqlhqtlyplf
rdlmietnpvpvktalamegltdlelrlplaplqpqnleklkttlsrtkeklakvehlwa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6t3tC (C:)
mkiqgtytaiispfhngqidrkalerllehqienridgivpvgttgesptlsyeehielv
rltaeivekrikifagtgsnstaeaihltkeaekigvdgvllvspyynrpsqeglfrhfs
aiaastslpillynipsrcgvdiavdtvkrlveknknivgikeaggsvdrvsqlvealpg
efsilsgddaltlpflsvgavgvvsvasnlfprpvsalvrlylegkpfearqlhqtlypl
frdlmietnpvpvktalamegltdlelrlplaplqpqnleklkttlsrtkeklakvehlw
a

    Sequence, based on observed residues (ATOM records): (download) 
    >6t3tC (C:)
kiqgtytaiispfhngqidrkalerllehqienridgivpvgttgesptlsyeehielvr
ltaeivekrikifagtgsnstaeaihltkeaekigvdgvllvspyynrpsqeglfrhfsa
iaastslpillynipsrcgvdiavdtvkrlveknknivgikeaggsvdrvsqlvealpge
fsilsgddaltlpflsvgavgvvsvasnlfprpvsalvrlylegkpfearqlhqtlyplf
rdlmietnpvpvktalamegltdlelrlplaplqpqnleklkttlsrtkeklakvehlwa

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6t3tD (D:)
mkiqgtytaiispfhngqidrkalerllehqienridgivpvgttgesptlsyeehielv
rltaeivekrikifagtgsnstaeaihltkeaekigvdgvllvspyynrpsqeglfrhfs
aiaastslpillynipsrcgvdiavdtvkrlveknknivgikeaggsvdrvsqlvealpg
efsilsgddaltlpflsvgavgvvsvasnlfprpvsalvrlylegkpfearqlhqtlypl
frdlmietnpvpvktalamegltdlelrlplaplqpqnleklkttlsrtkeklakvehlw
a

    Sequence, based on observed residues (ATOM records): (download) 
    >6t3tD (D:)
kiqgtytaiispfhngqidrkalerllehqienridgivpvgttgesptlsyeehielvr
ltaeivekrikifagtgsnstaeaihltkeaekigvdgvllvspyynrpsqeglfrhfsa
iaastslpillynipsrcgvdiavdtvkrlveknknivgikeaggsvdrvsqlvealpge
fsilsgddaltlpflsvgavgvvsvasnlfprpvsalvrlylegkpfearqlhqtlyplf
rdlmietnpvpvktalamegltdlelrlplaplqpqnleklkttlsrtkeklakvehlwa