PDB entry 6ovi

View 6ovi on RCSB PDB site
Description: Crystal Structure of KDPG Aldolase from Legionella Pneumophila with pyruvate captured at low pH as a covalent carbinolamine intermediate
Class: lyase
Keywords: SSGCID, KDPG ALDOLASE, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, LYASE
Deposited on 2019-05-07, released 2019-06-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-06-26, with a file datestamp of 2019-06-21.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Keto-deoxy-phosphogluconate aldolase
    Species: Legionella pneumophila [TaxId:446]
    Gene: C3927_01390
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ovia_
  • Chain 'B':
    Compound: Keto-deoxy-phosphogluconate aldolase
    Species: Legionella pneumophila [TaxId:446]
    Gene: C3927_01390
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ovib_
  • Chain 'C':
    Compound: Keto-deoxy-phosphogluconate aldolase
    Species: Legionella pneumophila [TaxId:446]
    Gene: C3927_01390
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ovic_
  • Heterogens: PVO, EDO, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6oviA (A:)
mahhhhhhmsfsewktqpgavfaaspvipvivikeledalplaealfaggihvlevtlrt
pvaikalellintfpdeligagtvitpgqfhdvvaagarfaispgqtrelliagqkseip
lipgvasvselmeglgmgynhfkffpaaaaggipmlkaisgvfpqvkfcptgginsknye
eylclpnvacvggswivpeeaiknhnwslitelcmavssqkrelcsqn

    Sequence, based on observed residues (ATOM records): (download) 
    >6oviA (A:)
wktqpgavfaaspvipvivikeledalplaealfaggihvlevtlrtpvaikalellint
fpdeligagtvitpgqfhdvvaagarfaispgqtrelliagqkseiplipgvasvselme
glgmgynhfkffpaaaaggipmlkaisgvfpqvkfcptgginsknyeeylclpnvacvgg
swivpeeaiknhnwslitelcmavssqkre

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6oviB (B:)
mahhhhhhmsfsewktqpgavfaaspvipvivikeledalplaealfaggihvlevtlrt
pvaikalellintfpdeligagtvitpgqfhdvvaagarfaispgqtrelliagqkseip
lipgvasvselmeglgmgynhfkffpaaaaggipmlkaisgvfpqvkfcptgginsknye
eylclpnvacvggswivpeeaiknhnwslitelcmavssqkrelcsqn

    Sequence, based on observed residues (ATOM records): (download) 
    >6oviB (B:)
wktqpgavfaaspvipvivikeledalplaealfaggihvlevtlrtpvaikalellint
fpdeligagtvitpgqfhdvvaagarfaispgqtrelliagqkseiplipgvasvselme
glgmgynhfkffpaaaaggipmlkaisgvfpqvkfcptgginsknyeeylclpnvacvgg
swivpeeaiknhnwslitelcmavss

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6oviC (C:)
mahhhhhhmsfsewktqpgavfaaspvipvivikeledalplaealfaggihvlevtlrt
pvaikalellintfpdeligagtvitpgqfhdvvaagarfaispgqtrelliagqkseip
lipgvasvselmeglgmgynhfkffpaaaaggipmlkaisgvfpqvkfcptgginsknye
eylclpnvacvggswivpeeaiknhnwslitelcmavssqkrelcsqn

    Sequence, based on observed residues (ATOM records): (download) 
    >6oviC (C:)
fsewktqpgavfaaspvipvivikeledalplaealfaggihvlevtlrtpvaikalell
intfpdeligagtvitpgqfhdvvaagarfaispgqtrelliagqkseiplipgvasvse
lmeglgmgynhfkffpaaaaggipmlkaisgvfpqvkfcptgginsknyeeylclpnvac
vggswivpeeaiknhnwslitelcmavss