PDB entry 6ofu

View 6ofu on RCSB PDB site
Description: X-ray crystal structure of the YdjI aldolase from Escherichia coli K12
Class: lyase
Keywords: aldolase, LYASE
Deposited on 2019-04-01, released 2019-04-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-04-24, with a file datestamp of 2019-04-19.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: YdjI aldolase
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ydjI, b1773, JW1762
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ofua_
  • Chain 'B':
    Compound: YdjI aldolase
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ydjI, b1773, JW1762
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ofub_
  • Chain 'C':
    Compound: YdjI aldolase
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ydjI, b1773, JW1762
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ofuc_
  • Chain 'D':
    Compound: YdjI aldolase
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ydjI, b1773, JW1762
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ofud_
  • Heterogens: ZN, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ofuA (A:)
mladirywendatnkhyaiahfnvwnaemlmgvidaaeeakspviisfgtgfvgntsfed
fshmmvsmaqkatvpvithwdhgrsmeiihnawthgmnslmrdasafdfeenirltkeav
dffhplgipveaelghvgnetvyeealagyhytdpdqaaefvertgcdslavaignqhgv
ytsepqlnfevvkrvrdavsvplvlhgasgisdadiktaislgiakinihtelcqaamva
vkenqdqpflhlerevrkavkeralekiklfgsdgkaelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6ofuA (A:)
mladirywendatnkhyaiahfnvwnaemlmgvidaaeeakspviisfgtgfvgntsfed
fshmmvsmaqkatvpvithwdhgrsmeiihnawthgmnslmrdasafdfeenirltkeav
dffhplgipveaelghvyhytdpdqaaefvertgcdslavaignqhqlnfevvkrvrdav
svplvlhgasgisdadiktaislgiakinihtelcqaamvavkenqdqpflhlerevrka
vkeralekiklfgsdgkae

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6ofuB (B:)
mladirywendatnkhyaiahfnvwnaemlmgvidaaeeakspviisfgtgfvgntsfed
fshmmvsmaqkatvpvithwdhgrsmeiihnawthgmnslmrdasafdfeenirltkeav
dffhplgipveaelghvgnetvyeealagyhytdpdqaaefvertgcdslavaignqhgv
ytsepqlnfevvkrvrdavsvplvlhgasgisdadiktaislgiakinihtelcqaamva
vkenqdqpflhlerevrkavkeralekiklfgsdgkaelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6ofuB (B:)
mladirywendatnkhyaiahfnvwnaemlmgvidaaeeakspviisfgtgfvgntsfed
fshmmvsmaqkatvpvithwdhgrsmeiihnawthgmnslmrdasafdfeenirltkeav
dffhplgipveaelgyhytdpdqaaefvertgcdslavaignqhgvytsepqlnfevvkr
vrdavsvplvlhgasgisdadiktaislgiakinihtelcqaamvavkenqdqpflhler
evrkavkeralekiklfgsdgkae

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6ofuC (C:)
mladirywendatnkhyaiahfnvwnaemlmgvidaaeeakspviisfgtgfvgntsfed
fshmmvsmaqkatvpvithwdhgrsmeiihnawthgmnslmrdasafdfeenirltkeav
dffhplgipveaelghvgnetvyeealagyhytdpdqaaefvertgcdslavaignqhgv
ytsepqlnfevvkrvrdavsvplvlhgasgisdadiktaislgiakinihtelcqaamva
vkenqdqpflhlerevrkavkeralekiklfgsdgkaelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6ofuC (C:)
mladirywendatnkhyaiahfnvwnaemlmgvidaaeeakspviisfgtgfvgntsfed
fshmmvsmaqkatvpvithwdhgrsmeiihnawthgmnslmrdasafdfeenirltkeav
dffhplgipveaelghvgnetvyeealytdpdqaaefvertgcdslavailnfevvkrvr
davsvplvlhgasgisdadiktaislgiakinihtelcqaamvavkenqdqpflhlerev
rkavkeralekiklfgsdgkae

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6ofuD (D:)
mladirywendatnkhyaiahfnvwnaemlmgvidaaeeakspviisfgtgfvgntsfed
fshmmvsmaqkatvpvithwdhgrsmeiihnawthgmnslmrdasafdfeenirltkeav
dffhplgipveaelghvgnetvyeealagyhytdpdqaaefvertgcdslavaignqhgv
ytsepqlnfevvkrvrdavsvplvlhgasgisdadiktaislgiakinihtelcqaamva
vkenqdqpflhlerevrkavkeralekiklfgsdgkaelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6ofuD (D:)
mladirywendatnkhyaiahfnvwnaemlmgvidaaeeakspviisfgtgfvgntsfed
fshmmvsmaqkatvpvithwdhgrsmeiihnawthgmnslmrdasafdfeenirltkeav
dffhplgipveaelgytdpdqaaefvertgcdslavaignqepqlnfevvkrvrdavsvp
lvlhgasgisdadiktaislgiakinihtelcqaamvavkenqdqpflhlerevrkavke
ralekiklfgsdgkae