PDB entry 6lf4

View 6lf4 on RCSB PDB site
Description: Crystal structure of VMB-1 bound to hydrolyzed meropenem
Class: hydrolase
Keywords: metallo-beta-lactamase, subclasse B1, HYDROLASE
Deposited on 2019-11-28, released 2020-03-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-03-25, with a file datestamp of 2020-03-20.
Experiment type: XRAY
Resolution: 2.01 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: VMB-1 metallo-beta-lactamase
    Species: Vibrio alginolyticus [TaxId:663]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LF4
    Domains in SCOPe 2.07: d6lf4a_
  • Chain 'B':
    Compound: VMB-1 metallo-beta-lactamase
    Species: Vibrio alginolyticus [TaxId:663]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LF4
    Domains in SCOPe 2.07: d6lf4b_
  • Chain 'C':
    Compound: VMB-1 metallo-beta-lactamase
    Species: Vibrio alginolyticus [TaxId:663]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LF4
    Domains in SCOPe 2.07: d6lf4c_
  • Chain 'D':
    Compound: VMB-1 metallo-beta-lactamase
    Species: Vibrio alginolyticus [TaxId:663]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LF4
    Domains in SCOPe 2.07: d6lf4d_
  • Heterogens: ZN, LMP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6lf4A (A:)
gshmnnegtkelklkklsdnvyqhisykrvepwgligasglvvingteahmidtpwttqg
tkqliewieakgltiksavvthfhedasgdipllndlkiktyatsltnkllklnqkevss
deissntfefidgvasvfypgaghtednivvwlpnekilfggcfvkslknknlgytgdan
isewpnsmqkvinrypdaklvvpghgevgdvsllkhtqalalsaaasnkkinkd

    Sequence, based on observed residues (ATOM records): (download) 
    >6lf4A (A:)
gtkelklkklsdnvyqhisykrvepwgligasglvvingteahmidtpwttqgtkqliew
ieakgltiksavvthfhedasgdipllndlkiktyatsltnkllklnqkevssdeissnt
fefidgvasvfypgaghtednivvwlpnekilfggcfvkslknknlgytgdanisewpns
mqkvinrypdaklvvpghgevgdvsllkhtqalalsaaa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6lf4B (B:)
gshmnnegtkelklkklsdnvyqhisykrvepwgligasglvvingteahmidtpwttqg
tkqliewieakgltiksavvthfhedasgdipllndlkiktyatsltnkllklnqkevss
deissntfefidgvasvfypgaghtednivvwlpnekilfggcfvkslknknlgytgdan
isewpnsmqkvinrypdaklvvpghgevgdvsllkhtqalalsaaasnkkinkd

    Sequence, based on observed residues (ATOM records): (download) 
    >6lf4B (B:)
gtkelklkklsdnvyqhisykrvepwgligasglvvingteahmidtpwttqgtkqliew
ieakgltiksavvthfhedasgdipllndlkiktyatsltnkllklnqkevssdeissnt
fefidgvasvfypgaghtednivvwlpnekilfggcfvkslknknlgytgdanisewpns
mqkvinrypdaklvvpghgevgdvsllkhtqalalsaaa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6lf4C (C:)
gshmnnegtkelklkklsdnvyqhisykrvepwgligasglvvingteahmidtpwttqg
tkqliewieakgltiksavvthfhedasgdipllndlkiktyatsltnkllklnqkevss
deissntfefidgvasvfypgaghtednivvwlpnekilfggcfvkslknknlgytgdan
isewpnsmqkvinrypdaklvvpghgevgdvsllkhtqalalsaaasnkkinkd

    Sequence, based on observed residues (ATOM records): (download) 
    >6lf4C (C:)
gtkelklkklsdnvyqhisykrvepwgligasglvvingteahmidtpwttqgtkqliew
ieakgltiksavvthfhedasgdipllndlkiktyatsltnkllklnqkevssdeissnt
fefidgvasvfypgaghtednivvwlpnekilfggcfvkslknknlgytgdanisewpns
mqkvinrypdaklvvpghgevgdvsllkhtqalalsaaa

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6lf4D (D:)
gshmnnegtkelklkklsdnvyqhisykrvepwgligasglvvingteahmidtpwttqg
tkqliewieakgltiksavvthfhedasgdipllndlkiktyatsltnkllklnqkevss
deissntfefidgvasvfypgaghtednivvwlpnekilfggcfvkslknknlgytgdan
isewpnsmqkvinrypdaklvvpghgevgdvsllkhtqalalsaaasnkkinkd

    Sequence, based on observed residues (ATOM records): (download) 
    >6lf4D (D:)
gtkelklkklsdnvyqhisykrvepwgligasglvvingteahmidtpwttqgtkqliew
ieakgltiksavvthfhedasgdipllndlkiktyatsltnkllklnqkevssdeissnt
fefidgvasvfypgaghtednivvwlpnekilfggcfvkslknknlgytgdanisewpns
mqkvinrypdaklvvpghgevgdvsllkhtqalalsaaa