PDB entry 6l70

View 6l70 on RCSB PDB site
Description: Complex structure of PEDV 3CLpro with GC376
Class: hydrolase
Keywords: 3C-Like Protease, complex, HYDROLASE
Deposited on 2019-10-30, released 2020-04-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-04-29, with a file datestamp of 2020-04-24.
Experiment type: XRAY
Resolution: 1.56 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PEDV main protease
    Species: Porcine epidemic diarrhea virus [TaxId:28295]
    Gene: Pol1
    Database cross-references and differences (RAF-indexed):
    • Uniprot K4L9I6 (0-297)
      • expression tag (298)
    Domains in SCOPe 2.07: d6l70a1, d6l70a2
  • Chain 'B':
    Compound: PEDV main protease
    Species: Porcine epidemic diarrhea virus [TaxId:28295]
    Gene: Pol1
    Database cross-references and differences (RAF-indexed):
    • Uniprot K4L9I6 (0-297)
      • expression tag (298)
    Domains in SCOPe 2.07: d6l70b1, d6l70b2
  • Heterogens: K36, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6l70A (A:)
aglrkmaqpsgvvekcivrvcygnmalnglwlgdtvmcprhviassttstidydyalsvl
rlhnfsissgnvflgvvgvtmrgallqikvnqnnvhtpkytyrtvrpgesfnilacydga
aagvygvnmrsnytirgsfingacgspgyninngtvefcylhqlelgsgchvgsdldgvm
yggyedqptlqvegasslftenvlaflyaalingstwwlsssriavdrfnewavhngmtt
vvntdcfsilaaktgvdvqrllasiqslhknfggkqilgytsltdefttgevirqmygvh
hhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6l70A (A:)
aglrkmaqpsgvvekcivrvcygnmalnglwlgdtvmcprhviassttstidydyalsvl
rlhnfsissgnvflgvvgvtmrgallqikvnqnnvhtpkytyrtvrpgesfnilacydga
aagvygvnmrsnytirgsfingacgspgyninngtvefcylhqlelgsgchvgsdldgvm
yggyedqptlqvegasslftenvlaflyaalingstwwlsssriavdrfnewavhngmtt
vvntdcfsilaaktgvdvqrllasiqslhknfggkqilgytsltdefttgevirqmygv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6l70B (B:)
aglrkmaqpsgvvekcivrvcygnmalnglwlgdtvmcprhviassttstidydyalsvl
rlhnfsissgnvflgvvgvtmrgallqikvnqnnvhtpkytyrtvrpgesfnilacydga
aagvygvnmrsnytirgsfingacgspgyninngtvefcylhqlelgsgchvgsdldgvm
yggyedqptlqvegasslftenvlaflyaalingstwwlsssriavdrfnewavhngmtt
vvntdcfsilaaktgvdvqrllasiqslhknfggkqilgytsltdefttgevirqmygvh
hhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6l70B (B:)
aglrkmaqpsgvvekcivrvcygnmalnglwlgdtvmcprhviassttstidydyalsvl
rlhnfsissgnvflgvvgvtmrgallqikvnqnnvhtpkytyrtvrpgesfnilacydga
aagvygvnmrsnytirgsfingacgspgyninngtvefcylhqlelgsgchvgsdldgvm
yggyedqptlqvegasslftenvlaflyaalingstwwlsssriavdrfnewavhngmtt
vvntdcfsilaaktgvdvqrllasiqslhknfggkqilgytsltdefttgevirqmygv