PDB entry 6dfs
View 6dfs on RCSB PDB site
Description: mouse TCR I.29 in complex with IAg7-p8E9E6ss
Class: immune system
Keywords: T cell receptor, type 1 diabetes, autoimmunity, IMMUNE SYSTEM
Deposited on
2018-05-15, released
2019-04-17
The last revision prior to the SCOPe 2.07 freeze date was dated
2019-04-17, with a file datestamp of
2019-04-12.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.1
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: mouse TCR alpha chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6dfsa1, d6dfsa2 - Chain 'B':
Compound: mouse TCR beta chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6dfsb1, d6dfsb2 - Chain 'C':
Compound: H-2 class II histocompatibility antigen, A-D alpha chain
Species: Mus musculus [TaxId:10090]
Gene: H2-Aa
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6dfsc1, d6dfsc2 - Chain 'D':
Compound: H2-Ab1 protein
Species: Mus musculus [TaxId:10090]
Gene: H2-Ab1
Database cross-references and differences (RAF-indexed):
- Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6dfsA (A:)
mekveqhestlsvregdsavinctytdtassyfpwykqeagkglhfvidirsnvdrkqsq
rlivlldkkakrfslhitatqpedsaiyfcaaspsnsggsnykltfgkgtlltvtpniqn
pdpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsava
wsnksdfacanafnnsiipedtffpspess
Sequence, based on observed residues (ATOM records): (download)
>6dfsA (A:)
mekveqhestlsvregdsavinctytdtassyfpwykqeagkglhfvidirsnvdrkqsq
rlivlldkkakrfslhitatqpedsaiyfcaaspsnsggsnykltfgkgtlltvtpniqn
pdpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsava
wsnksdfacanafnnsiipedtffpsp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6dfsB (B:)
mtlleqnprwrlvprgqavnlrcilknsqypwmswyqqdlqkqlqwlftlrspgdaevks
lpgadylatrvtdtelrlqvanmsqgrtlyctcsaglgyeqyfgpgtrltvledlknvfp
pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpa
lndsryclssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr
ad
Sequence, based on observed residues (ATOM records): (download)
>6dfsB (B:)
tlleqnprwrlvprgqavnlrcilknsqypwmswyqqdlqkqlqwlftlrspgdaevksl
pgadylatrvtdtelrlqvanmsqgrtlyctcsaglgyeqyfgpgtrltvledlknvfpp
evavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpal
ndsryclssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra
d
- Chain 'C':
Sequence, based on SEQRES records: (download)
>6dfsC (C:)
dieadhvgfygttvyqspgdigqythefdgdelfyvdldkkktvwrlpefgqlilfepqg
glqciaaekhnlgiltkrsnftpatneapqatvfpkspvllgqpntlicfvdnifppvin
itwlrnsksvtdgvyetsflvnrdhsfhklsyltfipsdddiydckvehwgleepvlkhw
epe
Sequence, based on observed residues (ATOM records): (download)
>6dfsC (C:)
dieadhvgfygttvyqspgdigqythefdgdelfyvdldkkktvwrlpefgqlilfepqg
glqciaaekhnlgiltkrsnftpatneapqatvfpkspvllgqpntlicfvdnifppvin
itwlrnsksvtdgvyetsflvnrdhsfhklsyltfipsdddiydckvehwglepvlkhwe
p
- Chain 'D':
No sequence available.