PDB entry 5ud1
View 5ud1 on RCSB PDB site
Description: Class II fructose-1,6-bisphosphate aldolase H180Q variant of Helicobacter pylori
Class: lyase
Keywords: Glycolysis, Metalloenzyme, LYASE
Deposited on
2016-12-23, released
2018-04-11
The last revision prior to the SCOPe 2.07 freeze date was dated
2018-04-11, with a file datestamp of
2018-04-06.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fructose-bisphosphate aldolase
Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
Gene: fba, HP_0176
Database cross-references and differences (RAF-indexed):
- Uniprot P56109 (0-306)
- conflict (47)
- conflict (66)
Domains in SCOPe 2.07: d5ud1a_ - Chain 'B':
Compound: Fructose-bisphosphate aldolase
Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
Gene: fba, HP_0176
Database cross-references and differences (RAF-indexed):
- Uniprot P56109 (0-306)
- conflict (47)
- conflict (66)
Domains in SCOPe 2.07: d5ud1b_ - Heterogens: NA, ZN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5ud1A (A:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiednisvdekdavlvnpkeaeqfvkesqvdylapaigtsq
gafkfkgepkldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfef
lqesvkgginkvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkl
lgsanki
Sequence, based on observed residues (ATOM records): (download)
>5ud1A (A:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelglvnpkeaeqfvkesqvdylapaigkldferlqevkrltniplvl
hgasaipdnvrksyldaggdlkgskgvpfeflqesvkgginkvntdtdlriafiaevrkv
anedksqfdlrkffspaqlalknvvkermkllgsanki
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5ud1B (B:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiednisvdekdavlvnpkeaeqfvkesqvdylapaigtsq
gafkfkgepkldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfef
lqesvkgginkvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkl
lgsanki
Sequence, based on observed residues (ATOM records): (download)
>5ud1B (B:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelglvnpkeaeqfvkesqvdylapaigkldferlqevkrltniplvl
hgasaipdnvrksyldaggdlkgskgvpfeflqesvkgginkvntdtdlriafiaevrkv
anedksqfdlrkffspaqlalknvvkermkllgsanki