PDB entry 5lri
View 5lri on RCSB PDB site
Description: photosynthetic reaction center mutant with glul212 replaced with trp (chain l, el212w)
Class: electron transport
Keywords: transmembrane, electron transport, photosynthesis
Deposited on
2016-08-19, released
2016-11-09
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-08-30, with a file datestamp of
2017-08-25.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: reaction center protein h chain
Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
Gene: puhA, RHOS4_18960, RSP_0291
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5lrih1, d5lrih2 - Chain 'L':
Compound: reaction center protein l chain
Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
Gene: pufL, RHOS4_18610, RSP_0257
Database cross-references and differences (RAF-indexed):
- Uniprot Q3J1A5 (0-280)
- engineered mutation (211)
Domains in SCOPe 2.07: d5lril_ - Chain 'M':
Compound: reaction center protein m chain
Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
Gene: pufM, RHOS4_18600, RSP_0256
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5lrim_ - Heterogens: BCL, BPH, U10, DD9, FE, LDA, SPN, CDL, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>5lriH (H:)
mvgvtafgnfdlaslaiysfwiflagliyylqtenmregyplenedgtpaanqgpfplpk
pktfilphgrgtltvpgpesedrpialartavsegfphaptgdpmkdgvgpaswvarrdl
peldghghnkikpmkaaagfhvsagknpiglpvrgcdleiagkvvdiwvdipeqmarfle
velkdgstrllpmqmvkvqsnrvhvnalssdlfagiptiksptevtlleedkicgyvagg
lmyaapkrksvvaamlaeya
Sequence, based on observed residues (ATOM records): (download)
>5lriH (H:)
dlaslaiysfwiflagliyylqtenmregyplenedgtpaanqgpfplpkpktfilphgr
gtltvpgpesedrpialartavsegfphaptgdpmkdgvgpaswvarrdlpeldghghnk
ikpmkaaagfhvsagknpiglpvrgcdleiagkvvdiwvdipeqmarflevelkdgstrl
lpmqmvkvqsnrvhvnalssdlfagiptiksptevtlleedkicgyvagglmyaapkrk
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>5lriL (L:)
allsferkyrvpggtlvggnlfdfwvgpfyvgffgvatfffaalgiiliawsavlqgtwn
pqlisvyppaleyglggaplakgglwqiiticatgafvswalreveicrklgigyhipfa
fafailayltlvlfrpvmmgawgyafpygiwthldwvsntgytygnfhynpahmiaisff
ftnalalalhgalvlsaanpekgkemrtpdhwdtffrdlvgysigtlgihrlglllslsa
vffsalcmiitgtiwfdqwvdwwqwwvklpwwanipgging
- Chain 'M':
Sequence, based on SEQRES records: (download)
>5lriM (M:)
aeyqnifsqvqvrgpadlgmtedvnlanrsgvgpfstllgwfgnaqlgpiylgslgvlsl
fsglmwfftigiwfwyqagwnpavflrdlfffsleppapeyglsfaaplkegglwliasf
fmfvavwswwgrtylraqalgmgkhtawaflsaiwlwmvlgfirpilmgswseavpygif
shldwtnnfslvhgnlfynpfhglsiaflygsallfamhgatilavsrfggereleqiad
rgtaaeraalfwrwtmgfnatmegihrwaiwmavlvtltggigillsgtvvdnwyvwgqn
hgmapln
Sequence, based on observed residues (ATOM records): (download)
>5lriM (M:)
yqnifsqvqvrgpadlgmtedvnlanrsgvgpfstllgwfgnaqlgpiylgslgvlslfs
glmwfftigiwfwyqagwnpavflrdlfffsleppapeyglsfaaplkegglwliasffm
fvavwswwgrtylraqalgmgkhtawaflsaiwlwmvlgfirpilmgswseavpygifsh
ldwtnnfslvhgnlfynpfhglsiaflygsallfamhgatilavsrfggereleqiadrg
taaeraalfwrwtmgfnatmegihrwaiwmavlvtltggigillsgtvvdnwyvwgqnhg