PDB entry 5k4g

View 5k4g on RCSB PDB site
Description: Wolinella succinogenes L-asparaginase S121 + L-aspartic acid, open conformation
Class: hydrolase
Keywords: S121, L-aspartic acid, open conformation, HYDROLASE
Deposited on 2016-05-20, released 2017-03-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-03-29, with a file datestamp of 2017-03-24.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-asparaginase
    Species: Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) [TaxId:273121]
    Gene: ansA, ansB, WS0660
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5k4ga_
  • Chain 'B':
    Compound: L-asparaginase
    Species: Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) [TaxId:273121]
    Gene: ansA, ansB, WS0660
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5k4gb_
  • Chain 'C':
    Compound: L-asparaginase
    Species: Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) [TaxId:273121]
    Gene: ansA, ansB, WS0660
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5k4gc_
  • Chain 'D':
    Compound: L-asparaginase
    Species: Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) [TaxId:273121]
    Gene: ansA, ansB, WS0660
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5k4gd_
  • Heterogens: ASP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5k4gA (A:)
makpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigs
qemtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamr
sgssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspnt
gkigtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqaga
kgiihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvates
lnpqkarvllmlaltktsdreaiqkifsty

    Sequence, based on observed residues (ATOM records): (download) 
    >5k4gA (A:)
kpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigsqe
mtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamrsg
ssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspntgk
igtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqagakg
iihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvatesln
pqkarvllmlaltktsdreaiqkifsty

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5k4gB (B:)
makpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigs
qemtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamr
sgssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspnt
gkigtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqaga
kgiihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvates
lnpqkarvllmlaltktsdreaiqkifsty

    Sequence, based on observed residues (ATOM records): (download) 
    >5k4gB (B:)
kpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigsqe
mtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamrsg
ssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspntgk
igtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqagakg
iihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvatesln
pqkarvllmlaltktsdreaiqkifsty

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5k4gC (C:)
makpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigs
qemtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamr
sgssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspnt
gkigtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqaga
kgiihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvates
lnpqkarvllmlaltktsdreaiqkifsty

    Sequence, based on observed residues (ATOM records): (download) 
    >5k4gC (C:)
kpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigsqe
mtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamrsg
ssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspntgk
igtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqagakg
iihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvatesln
pqkarvllmlaltktsdreaiqkifsty

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5k4gD (D:)
makpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigs
qemtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamr
sgssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspnt
gkigtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqaga
kgiihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvates
lnpqkarvllmlaltktsdreaiqkifsty

    Sequence, based on observed residues (ATOM records): (download) 
    >5k4gD (D:)
kpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigsqe
mtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamrsg
ssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspntgk
igtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqagakg
iihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvatesln
pqkarvllmlaltktsdreaiqkifsty