PDB entry 5jc8

View 5jc8 on RCSB PDB site
Description: Crystal structure of a putative short-chain dehydrogenase/reductase from Burkholderia xenovorans
Class: oxidoreductase
Keywords: SSGCID, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, OXIDOREDUCTASE
Deposited on 2016-04-14, released 2016-05-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-05-11, with a file datestamp of 2016-05-06.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: N/A
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative short-chain dehydrogenase/reductase
    Species: Burkholderia xenovorans (strain LB400) [TaxId:266265]
    Gene: Bxe_C0972
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5jc8a_
  • Chain 'B':
    Compound: putative short-chain dehydrogenase/reductase
    Species: Burkholderia xenovorans (strain LB400) [TaxId:266265]
    Gene: Bxe_C0972
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5jc8b_
  • Chain 'C':
    Compound: putative short-chain dehydrogenase/reductase
    Species: Burkholderia xenovorans (strain LB400) [TaxId:266265]
    Gene: Bxe_C0972
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5jc8c_
  • Chain 'D':
    Compound: putative short-chain dehydrogenase/reductase
    Species: Burkholderia xenovorans (strain LB400) [TaxId:266265]
    Gene: Bxe_C0972
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5jc8d_
  • Heterogens: BTB, EDO, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5jc8A (A:)
mahhhhhhmssagrlqgkvalvtgagcigpgwgngraiavrfaeegahviavdrdlasmd
atlelvraaggsvtpclcdvtdsasverlvadsvarcgrvdilvnnvgapspggpvalde
aqwamqlelnlttaflmckyvlpvmeqqgggaivniastsgirwtgaaqvgyaaakagmi
qmgrvvaveyaaknvrvnsvvpgllhtpmvdtkiahnqaggdvelllrkrqaripmpfmg
dgrdtanaalflasdearfvtgteivvdggmsarcd

    Sequence, based on observed residues (ATOM records): (download) 
    >5jc8A (A:)
agrlqgkvalvtgagcigpgwgngraiavrfaeegahviavdrdlasmdatlelvraagg
svtpclcdvtdsasverlvadsvarcgrvdilvnnvgapspggpvaldeaqwamqlelnl
ttaflmckyvlpvmeqqgggaivniastsgirwtgaaqvgyaaakagmiqmgrvvaveya
aknvrvnsvvpgllhtpmvdtkiahnggdvelllrkrqaripmpfmgdgrdtanaalfla
sdearfvtgteivvdggmsarcd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5jc8B (B:)
mahhhhhhmssagrlqgkvalvtgagcigpgwgngraiavrfaeegahviavdrdlasmd
atlelvraaggsvtpclcdvtdsasverlvadsvarcgrvdilvnnvgapspggpvalde
aqwamqlelnlttaflmckyvlpvmeqqgggaivniastsgirwtgaaqvgyaaakagmi
qmgrvvaveyaaknvrvnsvvpgllhtpmvdtkiahnqaggdvelllrkrqaripmpfmg
dgrdtanaalflasdearfvtgteivvdggmsarcd

    Sequence, based on observed residues (ATOM records): (download) 
    >5jc8B (B:)
agrlqgkvalvtgagcigpgwgngraiavrfaeegahviavdrdlasmdatlelvraagg
svtpclcdvtdsasverlvadsvarcgrvdilvnnvgapspggpvaldeaqwamqlelnl
ttaflmckyvlpvmeqqgggaivniastsgirwtgaaqvgyaaakagmiqmgrvvaveya
aknvrvnsvvpgllhtpmvdtkllrkrqaripmpfmgdgrdtanaalflasdearfvtgt
eivvdggmsarcd

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5jc8C (C:)
mahhhhhhmssagrlqgkvalvtgagcigpgwgngraiavrfaeegahviavdrdlasmd
atlelvraaggsvtpclcdvtdsasverlvadsvarcgrvdilvnnvgapspggpvalde
aqwamqlelnlttaflmckyvlpvmeqqgggaivniastsgirwtgaaqvgyaaakagmi
qmgrvvaveyaaknvrvnsvvpgllhtpmvdtkiahnqaggdvelllrkrqaripmpfmg
dgrdtanaalflasdearfvtgteivvdggmsarcd

    Sequence, based on observed residues (ATOM records): (download) 
    >5jc8C (C:)
agrlqgkvalvtgagcigpgwgngraiavrfaeegahviavdrdlasmdatlelvraagg
svtpclcdvtdsasverlvadsvarcgrvdilvnnvgapspggpvaldeaqwamqlelnl
ttaflmckyvlpvmeqqgggaivniastsgirwtgaaqvgyaaakagmiqmgrvvaveya
aknvrvnsvvpgllhtpmvdtllrkrqaripmpfmgdgrdtanaalflasdearfvtgte
ivvdggmsarcd

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5jc8D (D:)
mahhhhhhmssagrlqgkvalvtgagcigpgwgngraiavrfaeegahviavdrdlasmd
atlelvraaggsvtpclcdvtdsasverlvadsvarcgrvdilvnnvgapspggpvalde
aqwamqlelnlttaflmckyvlpvmeqqgggaivniastsgirwtgaaqvgyaaakagmi
qmgrvvaveyaaknvrvnsvvpgllhtpmvdtkiahnqaggdvelllrkrqaripmpfmg
dgrdtanaalflasdearfvtgteivvdggmsarcd

    Sequence, based on observed residues (ATOM records): (download) 
    >5jc8D (D:)
agrlqgkvalvtgagcigpgwgngraiavrfaeegahviavdrdlasmdatlelvraagg
svtpclcdvtdsasverlvadsvarcgrvdilvnnvgapspggpvaldeaqwamqlelnl
ttaflmckyvlpvmeqqgggaivniastsgirwtgaaqvgyaaakagmiqmgrvvaveya
aknvrvnsvvpgllhtpmvdtkiahngdvelllrkrqaripmpfmgdgrdtanaalflas
dearfvtgteivvdggmsarcd