PDB entry 5gp1

View 5gp1 on RCSB PDB site
Description: Crystal structure of ZIKV NS5 Methyltransferase in complex with GTP and SAH
Class: transferase
Keywords: methyltransferase GTP complex, TRANSFERASE
Deposited on 2016-07-30, released 2016-12-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 2.44 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA-directed RNA polymerase NS5
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gp1a_
  • Chain 'B':
    Compound: RNA-directed RNA polymerase NS5
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gp1b_
  • Chain 'C':
    Compound: RNA-directed RNA polymerase NS5
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5gp1c_
  • Heterogens: SO4, GTA, SAH, NI, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5gp1A (A:)
gsvdtgetlgekwkarlnqmsalefysykksgitevcreearralkdgvatgghavsrgs
aklrwlvergylqpygkvidlgcgrggwsyyaatirkvqevkgytkggpgheepmlvqsy
gwnivrlksgvdvfhmaaepcdtllcdigesssspeveeartlrvlsmvgdwlekrpgaf
cikvlcpytstmmetlerlqrryggglvrvplsrnsthemywvsgaksntiksvsttsql
llgrmdgprrpvkyeedvnlgsgtraaas

    Sequence, based on observed residues (ATOM records): (download) 
    >5gp1A (A:)
tgetlgekwkarlnqmsalefysykksgitevcreearralkdgvatgghavsrgsaklr
wlvergylqpygkvidlgcgrggwsyyaatirkvqevkgytkggpgheepmlvqsygwni
vrlksgvdvfhmaaepcdtllcdigesssspeveeartlrvlsmvgdwlekrpgafcikv
lcpytstmmetlerlqrryggglvrvplsrnsthemywvsgaksntiksvsttsqlllgr
mdgprrpvkyeedvnlgsgtra

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5gp1B (B:)
gsvdtgetlgekwkarlnqmsalefysykksgitevcreearralkdgvatgghavsrgs
aklrwlvergylqpygkvidlgcgrggwsyyaatirkvqevkgytkggpgheepmlvqsy
gwnivrlksgvdvfhmaaepcdtllcdigesssspeveeartlrvlsmvgdwlekrpgaf
cikvlcpytstmmetlerlqrryggglvrvplsrnsthemywvsgaksntiksvsttsql
llgrmdgprrpvkyeedvnlgsgtraaas

    Sequence, based on observed residues (ATOM records): (download) 
    >5gp1B (B:)
etlgekwkarlnqmsalefysykksgitevcreearralkdgvatgghavsrgsaklrwl
vergylqpygkvidlgcgrggwsyyaatirkvqevkgytkggpgheepmlvqsygwnivr
lksgvdvfhmaaepcdtllcdigesssspeveeartlrvlsmvgdwlekrpgafcikvlc
pytstmmetlerlqrryggglvrvplsrnsthemywvsgaksntiksvsttsqlllgrmd
gprrpvkyeedvnlgsgtra

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5gp1C (C:)
gsvdtgetlgekwkarlnqmsalefysykksgitevcreearralkdgvatgghavsrgs
aklrwlvergylqpygkvidlgcgrggwsyyaatirkvqevkgytkggpgheepmlvqsy
gwnivrlksgvdvfhmaaepcdtllcdigesssspeveeartlrvlsmvgdwlekrpgaf
cikvlcpytstmmetlerlqrryggglvrvplsrnsthemywvsgaksntiksvsttsql
llgrmdgprrpvkyeedvnlgsgtraaas

    Sequence, based on observed residues (ATOM records): (download) 
    >5gp1C (C:)
tgetlgekwkarlnqmsalefysykksgitevcreearralkdgvatgghavsrgsaklr
wlvergylqpygkvidlgcgrggwsyyaatirkvqevkgytkggpgheepmlvqsygwni
vrlksgvdvfhmaaepcdtllcdigesssspeveeartlrvlsmvgdwlekrpgafcikv
lcpytstmmetlerlqrryggglvrvplsrnsthemywvsgaksntiksvsttsqlllgr
mdgprrpvkyeedvnlgsgtr