PDB entry 5fiv

View 5fiv on RCSB PDB site
Description: structural studies of hiv and fiv proteases complexed with an efficient inhibitor of fiv pr
Class: hydrolase
Keywords: fiv protease, v59i, inhibitor
Deposited on 1998-12-02, released 1998-12-09
The last revision prior to the SCOP 1.73 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.164
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: retropepsin
    Species: Feline immunodeficiency virus (isolate Petaluma)
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16088 (Start-112)
      • conflict (55)
    Domains in SCOP 1.73: d5fiva_
  • Heterogens: INT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5fivA (A:)
vgttttlekrpeilifvngypikflldtgaditilnrrdfqvknsiengrqnmigigggk
rgtnyinvhleirdenyktqcifgnvcvlednsliqpllgrdnmikfnirlvm

    Sequence, based on observed residues (ATOM records): (download) 
    >5fivA (A:)
gttttlekrpeilifvngypikflldtgaditilnrrdfqvknsiengrqnmigigggkr
gtnyinvhleirdenyktqcifgnvcvlednsliqpllgrdnmikfnirlvm