PDB entry 5fh3

View 5fh3 on RCSB PDB site
Description: The structure of rat cytosolic PEPCK variant E89A in complex with oxalic acid and GTP
Class: lyase
Keywords: kinase, gluconeogenesis, lyase
Deposited on 2015-12-21, released 2016-11-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-20, with a file datestamp of 2017-09-15.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P07379 (Start-621)
      • engineered mutation (88)
    Domains in SCOPe 2.07: d5fh3a1, d5fh3a2
  • Heterogens: MN, OXL, GTP, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5fh3A (A:)
mppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahm
qeegvirklkkydncwlaltdprdvariasktviitqeqrdtvpipksgqsqlgrwmsee
dfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsv
lealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsl
lgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptl
pgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnv
aetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpaw
espegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimhdpf
amrpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewm
fgriegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqv
nadlpyeierelralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >5fh3A (A:)
lhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqeeg
virklkkydncwlaltdprdvariasktviitqeqrdtvpipksgqsqlgrwmseedfek
afnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvleal
gdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllgkk
cfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwk
vecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaets
dggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespe
gvpiegiifggrrpagvplvyealswqhgvfvgaamrseatkvimhdpfamrpffgynfg
kylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsak
ltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeiere
lralkqrisqm