PDB entry 5e0i

View 5e0i on RCSB PDB site
Description: Crystal structure of the HBV capsid Y132A mutant (VCID 8772) in complex with NVR10-001E2 at 1.95A resolution
Class: viral protein
Keywords: nvr10-001e2, viral protein
Deposited on 2015-09-28, released 2015-12-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-12-16, with a file datestamp of 2015-12-11.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype adw [TaxId:10419]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (1-End)
      • expression tag (0)
      • engineered mutation (132)
      • expression tag (152-156)
    Domains in SCOPe 2.07: d5e0ia1, d5e0ia2, d5e0ia3
  • Chain 'B':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype adw [TaxId:10419]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (1-End)
      • expression tag (0)
      • engineered mutation (132)
      • expression tag (152-156)
    Domains in SCOPe 2.07: d5e0ib1, d5e0ib2, d5e0ib3
  • Chain 'C':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype adw [TaxId:10419]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (1-End)
      • expression tag (0)
      • engineered mutation (132)
      • expression tag (152-156)
    Domains in SCOPe 2.07: d5e0ic1, d5e0ic2, d5e0ic3
  • Chain 'D':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype adw [TaxId:10419]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (1-End)
      • engineered mutation (132)
      • expression tag (152-156)
    Domains in SCOPe 2.07: d5e0id1, d5e0id2
  • Chain 'E':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype adw [TaxId:10419]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (1-End)
      • expression tag (0)
      • engineered mutation (132)
      • expression tag (152-156)
    Domains in SCOPe 2.07: d5e0ie1, d5e0ie2, d5e0ie3
  • Chain 'F':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype adw [TaxId:10419]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (1-End)
      • expression tag (0)
      • engineered mutation (132)
      • expression tag (152-156)
    Domains in SCOPe 2.07: d5e0if1, d5e0if2, d5e0if3
  • Heterogens: 5J6, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5e0iA (A:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleyl
vsfgvwirtppaarppnapilstlpettvvklenlyf

    Sequence, based on observed residues (ATOM records): (download) 
    >5e0iA (A:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleyl
vsfgvwirtppaarppnapilstlpettvenlyf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5e0iB (B:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleyl
vsfgvwirtppaarppnapilstlpettvvklenlyf

    Sequence, based on observed residues (ATOM records): (download) 
    >5e0iB (B:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleyl
vsfgvwirtppaarppnapilstlpettvenlyf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5e0iC (C:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleyl
vsfgvwirtppaarppnapilstlpettvvklenlyf

    Sequence, based on observed residues (ATOM records): (download) 
    >5e0iC (C:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtdlvvsyvntnvglkfrqllwfhiscltfgretvleylvsfgvwir
tppaarppnapilstlpettvenlyf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5e0iD (D:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleyl
vsfgvwirtppaarppnapilstlpettvvklenlyf

    Sequence, based on observed residues (ATOM records): (download) 
    >5e0iD (D:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvsrdlvvsyvntnvglkfrqllwfhiscltfgretvleylvsfgvwirt
ppaarppnapilstlpettvenlyf

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5e0iE (E:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleyl
vsfgvwirtppaarppnapilstlpettvvklenlyf

    Sequence, based on observed residues (ATOM records): (download) 
    >5e0iE (E:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwrdlvvsyvntnvglkfrqllwfhiscltfgretvleylvsfgvwirtp
paarppnapilstlpettvenlyf

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5e0iF (F:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleyl
vsfgvwirtppaarppnapilstlpettvvklenlyf

    Sequence, based on observed residues (ATOM records): (download) 
    >5e0iF (F:)
smdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqai
lcwgdlmtlatwvntnvglkfrqllwfhiscltfgretvleylvsfgvwirtppaarppn
apilstlpettvenlyf