PDB entry 5dhx

View 5dhx on RCSB PDB site
Description: HIV-1 Rev NTD dimers with variable crossing angles
Class: immune system
Keywords: HIV, helical hairpin, RNA-binding, nuclear export, immune system
Deposited on 2015-08-31, released 2016-06-22
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-08-30, with a file datestamp of 2017-08-25.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: Anti-Rev Antibody Fab single-chain variable fragment, light chain,Anti-Rev Antibody Fab single-chain variable fragment, heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DHX (Start-110)
    • PDB 5DHX (129-245)
    Domains in SCOPe 2.07: d5dhxb1, d5dhxb2, d5dhxb3
  • Chain 'C':
    Compound: Protein Rev
    Species: HUMAN IMMUNODEFICIENCY VIRUS 1 [TaxId:11676]
    Gene: rev
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Anti-Rev Antibody Fab single-chain variable fragment, light chain,Anti-Rev Antibody Fab single-chain variable fragment, heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DHX (Start-110)
    • PDB 5DHX (129-245)
    Domains in SCOPe 2.07: d5dhxl1, d5dhxl2, d5dhxl3
  • Chain 'M':
    Compound: Protein Rev
    Species: HUMAN IMMUNODEFICIENCY VIRUS 1 [TaxId:11676]
    Gene: rev
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5dhxB (B:)
aelvmtqtpssvsepvggtvtikcqasqsisswlswyqqkpgqppklliydasnlasgvp
srfmgsgsgteytltisgvqredaatyyclggypaasyrtafgggteleiiggssrssss
ggggsggggqeqlvesggrlvtpgtaltltckvsgfslsgfwlnwvrqapgkglewvgai
yrgsgsewyaswakgrftisdtsttvtlkltspttedtatyfcaadttdngyftiwgpgt
lvtvsshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5dhxB (B:)
elvmtqtpssvsepvggtvtikcqasqsisswlswyqqkpgqppklliydasnlasgvps
rfmgsgsgteytltisgvqredaatyyclggypaasyrtafgggteleiiqeqlvesggr
lvtpgtaltltckvsgfslsgfwlnwvrqapgkglewvgaiyrgsgsewyaswakgrfti
sdtsttvtlkltspttedtatyfcaadttdngyftiwgpgtlvtvsshhhh

  • Chain 'C':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >5dhxL (L:)
aelvmtqtpssvsepvggtvtikcqasqsisswlswyqqkpgqppklliydasnlasgvp
srfmgsgsgteytltisgvqredaatyyclggypaasyrtafgggteleiiggssrssss
ggggsggggqeqlvesggrlvtpgtaltltckvsgfslsgfwlnwvrqapgkglewvgai
yrgsgsewyaswakgrftisdtsttvtlkltspttedtatyfcaadttdngyftiwgpgt
lvtvsshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5dhxL (L:)
elvmtqtpssvsepvggtvtikcqasqsisswlswyqqkpgqppklliydasnlasgvps
rfmgsgsgteytltisgvqredaatyyclggypaasyrtafgggteleiiqeqlvesggr
lvtpgtaltltckvsgfslsgfwlnwvrqapgkglewvgaiyrgsgsewyaswakgrfti
sdtsttvtlkltspttedtatyfcaadttdngyftiwgpgtlvtvss

  • Chain 'M':
    No sequence available.