PDB entry 5ccd

View 5ccd on RCSB PDB site
Description: Joint X-ray/neutron structure of MTAN D198N complex with SAH
Class: Hydrolase
Keywords: Helicobacter pylori, Neutron, S-Adenosylhomocysteine, N-Glycosyl Hydrolases, Hydrolase
Deposited on 2015-07-01, released 2016-11-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-12-28, with a file datestamp of 2016-12-22.
Experiment type: XRAYNEUT
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aminodeoxyfutalosine nucleosidase
    Species: Helicobacter pylori (strain J99 / ATCC 700824) [TaxId:85963]
    Gene: mtnN, mtn, jhp_0082
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9ZMY2 (3-231)
      • expression tag (2)
      • engineered mutation (199)
    Domains in SCOPe 2.07: d5ccda1, d5ccda2
  • Heterogens: SAH, DOD

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ccdA (A:)
gpgqkigilgamreeitpilelfgvdfeeiplggnvfhkgvyhnkeiivayskigkvhst
ltttsmilafgvqkvlfsgvagslvkdlkindllvatqlvqhdvdlsafdhplgfipesa
ifietsgslnalakkianeqhialkegviasgdqfvhskerkeflvsefkasavemegas
vafvcqkfgvpccvlrsisnnadekagmsfdefleksahtsakflksmvdel

    Sequence, based on observed residues (ATOM records): (download) 
    >5ccdA (A:)
gqkigilgamreeitpilelfgvdfeeiplggnvfhkgvyhnkeiivayskigkvhstlt
ttsmilafgvqkvlfsgvagslvkdlkindllvatqlvqhdvdlsafdhplgfipesaif
ietsgslnalakkianeqhialkegviasgdqfvhskerkeflvsefkasavemegasva
fvcqkfgvpccvlrsisnnadekagmsfdefleksahtsakflksmvdel