PDB entry 4wo4
View 4wo4 on RCSB PDB site
Description: The molecular bases of Delta/Alpha beta T cell-mediated antigen recognition.
Class: immune system
Keywords: Immunity, IMMUNE SYSTEM
Deposited on
2014-10-15, released
2014-11-26
The last revision prior to the SCOPe 2.04 freeze date was dated
2014-11-26, with a file datestamp of
2014-11-21.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.196
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Antigen-presenting glycoprotein CD1d
Species: Homo sapiens [TaxId:9606]
Gene: CD1D
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4wo4a1, d4wo4a2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4wo4b_ - Chain 'C':
Compound: TCR variable DELTA 1 CHAIN and TCR constant Alpha
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: TCR variable BETA 2 (TRVB20) chain and TCR constant BETA
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: JLS, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4wo4A (A:)
rlfplrclqissfansswtrtdglawlgelqthswsndsdtvrslkpwsqgtfsdqqwet
lqhifrvyrssftrdvkefakmlrlsyplelqvsagcevhpgnasnnffhvafqgkdils
fqgtsweptqeaplwvnlaiqvlnqdkwtretvqwllngtcpqfvsgllesgkselkkqv
kpkawlsrgpspgpgrlllvchvsgfypkpvwvkwmrgeqeqqgtqpgdilpnadetwyl
ratldvvageaaglscrvkhsslegqdivlywpr
Sequence, based on observed residues (ATOM records): (download)
>4wo4A (A:)
lfplrclqissfansswtrtdglawlgelqthswsndsdtvrslkpwsqgtfsdqqwetl
qhifrvyrssftrdvkefakmlrlsyplelqvsagcevhpgnasnnffhvafqgkdilsf
qgtsweptqeaplwvnlaiqvlnqdkwtretvqwllngtcpqfvsgllesgkselkkqvk
pkawlsrgpspgpgrlllvchvsgfypkpvwvkwmrgeqeqqgtqpgdilpnadetwylr
atldvvageaaglscrvkhsslegqdivlywpr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4wo4B (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
Sequence, based on observed residues (ATOM records): (download)
>4wo4B (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrd
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.