PDB entry 4qry

View 4qry on RCSB PDB site
Description: the ground state and the N intermediate of pharaonis halorhodopsin in complex with bromide ion
Class: membrane protein
Keywords: 7 transmembrane helices, light-driven chloride ion pump, retinal bacterioruberin, membrane, MEMBRANE PROTEIN
Deposited on 2014-07-02, released 2015-06-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-06-17, with a file datestamp of 2015-06-12.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis [TaxId:2257]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4qrya_
  • Chain 'B':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis [TaxId:2257]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4qryb_
  • Chain 'C':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis [TaxId:2257]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4qryc_
  • Chain 'E':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis [TaxId:2257]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4qrye_
  • Chain 'F':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis [TaxId:2257]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4qryf_
  • Chain 'G':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis [TaxId:2257]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4qryg_
  • Heterogens: RET, BR, BNG, L2P, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4qryA (A:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >4qryA (A:)
aevtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpv
vsiasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmill
algllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillv
ewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivak
yifaflllnyltsnegvvsgs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4qryB (B:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >4qryB (B:)
vtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpvvs
iasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmillal
gllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillvew
aqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivakyi
faflllnyltsnegvvsg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4qryC (C:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >4qryC (C:)
evtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpvv
siasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmilla
lgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillve
waqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivaky
ifaflllnyltsnegvvsg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4qryE (E:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >4qryE (E:)
aevtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpv
vsiasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmill
algllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillv
ewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivak
yifaflllnyltsnegvvsgs

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4qryF (F:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >4qryF (F:)
evtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpvv
siasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmilla
lgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillve
waqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivaky
ifaflllnyltsnegvvsg

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4qryG (G:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >4qryG (G:)
evtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpvv
siasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmilla
lgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillve
waqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivaky
ifaflllnyltsnegvvsg