PDB entry 4ono

View 4ono on RCSB PDB site
Description: CD1c in complex with PM (phosphomycoketide)
Class: immune system
Keywords: Ig fold, CD1c, Antigen presentation, TCR, IMMUNE SYSTEM
Deposited on 2014-01-28, released 2014-10-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-07-26, with a file datestamp of 2017-07-21.
Experiment type: XRAY
Resolution: 2.71 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-2-microglobulin/T-cell surface glycoprotein CD1c/T-cell surface glycoprotein CD1b chimeric protein
    Species: Homo sapiens [TaxId:9606]
    Gene: CD1B CD1C B2M CDABP0092 HDCMA22P, CD1C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61769 (1-99)
      • expression tag (0)
    • Uniprot P29017 (120-297)
      • linker (100-103)
      • engineered mutation (166)
      • engineered mutation (171)
      • engineered mutation (222)
      • engineered mutation (242)
    • Uniprot P29016 (298-394)
      • engineered mutation (355-356)
      • expression tag (393-394)
    Domains in SCOPe 2.07: d4onoa1, d4onoa2, d4onoa3, d4onoa4, d4onoa5
  • Heterogens: PMK, CL, MLI, NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4onoA (A:)
piqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmggggsggsgsgggssadasq
ehvsfhviqifsfvnqswargqgsgwldelqthgwdsesgtiiflhqwskgqfsneelsd
lellfrfylfgltreiqdhasqdyskypfevqvkagcelhsggspegffqvafngldlls
fqqttwvpspgcgslaqsvchllnhqyegvtetvynlirstcprfllglldagkmyvhrq
vkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnaqgtwy
lratldvadgeaaglscrvkhsslegqdiilywhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4onoA (A:)
piqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmggggehvsfhviqifsfvnq
swargqgsgwldelqthgwdsesgtiiflhqwskgqfsneelsdlellfrfylfgltrei
qdhasypfevqvkagcelhsggspegffqvafngldllsfqqttwvpspgcgslaqsvch
llnhqyegvtetvynlirstcprfllglldagkmyvhrqvkpeawlssgpspgpgrlqlv
chvsgfypkpvwvmwmrgeqeqqgtqlgdilpnaqgtwylratldvadgeaaglscrvkh
sslegqdiilywhh