PDB entry 4lgr
View 4lgr on RCSB PDB site
Description: Ricin A chain bound to camelid nanobody (VHH3)
Class: hydrolase/immune system
Keywords: Ribosome inhibiting protein 2, HYDROLASE-IMMUNE SYSTEM complex
Deposited on
2013-06-28, released
2014-06-11
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-15, with a file datestamp of
2017-11-10.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ricin
Species: Ricinus communis [TaxId:3988]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4lgra_ - Chain 'B':
Compound: Camelid nanobody (VHH3)
Species: Vicugna pacos [TaxId:30538]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4lgrb_ - Heterogens: ZN, ACY, CL, EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4lgrA (A:)
qypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvelsn
haelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggnyd
rleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqyi
egemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvyd
vsilipiialmvyrc
Sequence, based on observed residues (ATOM records): (download)
>4lgrA (A:)
qypiinfttagatvqsytnfiravrgrltadvrheipvlpnrvglpinqrfilvelsnha
elsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggnydrl
eqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqyieg
emrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvydvs
ilipiialmvyrc
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4lgrB (B:)
vqlvesggglvqpggslrlhcaasgsiasiyrtcwyrqgtgkqrelvaaitsggntyyad
svkgrftisrdnakntidlqmnslkpedtavyycnadeagiggfndywgqgtqvtvssah
hs