PDB entry 4ki7
View 4ki7 on RCSB PDB site
Description: Design and structural analysis of aromatic inhibitors of type II dehydroquinase from Mycobacterium tuberculosis - compound 41c [3-hydroxy-5-(3-nitrophenoxy)benzoic acid]
Class: Lyase/Lyase Inhibitor
Keywords: DHQase, dehydratase, Lyase-Lyase Inhibitor complex
Deposited on
2013-05-01, released
2014-05-14
The last revision prior to the SCOPe 2.04 freeze date was dated
2014-05-14, with a file datestamp of
2014-05-09.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.193
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4ki7a_ - Chain 'B':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'J':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'K':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'M':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'N':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'O':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'P':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'Q':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'R':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'S':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'T':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'U':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'V':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'W':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Chain 'X':
Compound: 3-dehydroquinate dehydratase
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: aroD, aroK, aroQ, MT2612, MTCY159.19, Rv2537c
Database cross-references and differences (RAF-indexed):
- Heterogens: 1R2, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4ki7A (A:)
lyfqshmselivnvingpnlgrlgrrepavyggtthdelvaliereaaelglkavvrqsd
seaqlldwihqaadaaepvilnagglthtsvalrdacaelsaplievhisnvhareefrr
hsylspiatgvivglgiqgyllalrylaehvgt
Sequence, based on observed residues (ATOM records): (download)
>4ki7A (A:)
livnvingpnlgrlgggtthdelvaliereaaelglkavvrqsdseaqlldwihqaadaa
epvilnagglthtsvalrdacaelsaplievhisnvhareefrrhsylspiatgvivglg
iqgyllalrylaeh
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.
- Chain 'K':
No sequence available.
- Chain 'L':
No sequence available.
- Chain 'M':
No sequence available.
- Chain 'N':
No sequence available.
- Chain 'O':
No sequence available.
- Chain 'P':
No sequence available.
- Chain 'Q':
No sequence available.
- Chain 'R':
No sequence available.
- Chain 'S':
No sequence available.
- Chain 'T':
No sequence available.
- Chain 'U':
No sequence available.
- Chain 'V':
No sequence available.
- Chain 'W':
No sequence available.
- Chain 'X':
No sequence available.