PDB entry 4khr

View 4khr on RCSB PDB site
Description: HCV NS5B GT1A C316Y with GSK5852
Class: replication/replication inhibitor
Keywords: HCV Polymerase, HCV NS5B, Site IV Inhibitor, boron, P66, P70, RNA dependent RNA Polymerase, RNA directed RNA Polymerase, Polymerase, RNS Dependent RNA Polymerase, REPLICATION-REPLICATION INHIBITOR complex
Deposited on 2013-05-01, released 2013-05-29
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-05-29, with a file datestamp of 2013-05-24.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.21
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NS5B RNA-dependent RNA polymerase
    Species: Hepatitis C virus subtype 1a [TaxId:31646]
    Gene: NS5B
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1PPP0 (1-End)
      • variant (5)
      • variant (11)
      • engineered mutation (101)
      • engineered mutation (110)
      • engineered mutation (113-114)
      • engineered mutation (316)
      • variant (546)
    Domains in SCOPe 2.03: d4khra_
  • Chain 'B':
    Compound: NS5B RNA-dependent RNA polymerase
    Species: Hepatitis C virus subtype 1a [TaxId:31646]
    Gene: NS5B
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1PPP0 (1-End)
      • variant (5)
      • variant (11)
      • engineered mutation (101)
      • engineered mutation (110)
      • engineered mutation (113-114)
      • engineered mutation (316)
      • variant (546)
    Domains in SCOPe 2.03: d4khrb_
  • Heterogens: SO4, 1PV, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4khrA (A:)
msmsyswtgalvtpcaaeeqklpinalsnsllrhhnlvysttsrsacqrqkkvtfdrlqv
ldshyqdvlkevkaaaskvkanllsveeacsltpphsakskygygakdvrshasravahi
nsvwkdlledsvtpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvv
sklplavmgssygfqyspgqrveflvqawkskktpmgfsydtrcfdstvtesdirteeai
yqccdldpqarvaikslterlyvggpltnsrgencgyrrcrasgvlttscgntltcyika
raacraaglqdctmlvygddlvvicesagvqedaaslrafteamtrysappgdppqpeyd
lelitscssnvsvahdgagkrvyyltrdpttplaraawetarhtpvnswlgniimfaptl
warmilmthffsvliardqleqaldceiygacysiepldlppiiqrlhglsafslhsysp
geinrvaaclrklgvpplrawrhrarsvrarllsrggraaicgkylfnwavrtklkltpi
aaagqlalsgwftagysggdiyhsvsharprlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4khrA (A:)
smsyswtgalvtpcaaeeqklpinalsnsllrhhnlvysttsrsacqrqkkvtfdrlqvl
dshyqdvlkevkaaaskvkanllsveeacsltpphsakskygygakdvrshasravahin
svwkdlledsvtpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvvs
klplavmgssygfqyspgqrveflvqawkskktpmgfsydtrcfdstvtesdirteeaiy
qccdldpqarvaikslterlyvggpltnsrgencgyrrcrasgvlttscgntltcyikar
aacraaglqdctmlvygddlvvicesagvqedaaslrafteamtrysappgdppqpeydl
elitscssnvsvahdgagkrvyyltrdpttplaraawetarhtpvnswlgniimfaptlw
armilmthffsvliardqleqaldceiygacysiepldlppiiqrlhglsafslhsyspg
einrvaaclrklgvpplrawrhrarsvrarllsrggraaicgkylfnwavrtklkltpia
aagqlalsgwftagysggdiyh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4khrB (B:)
msmsyswtgalvtpcaaeeqklpinalsnsllrhhnlvysttsrsacqrqkkvtfdrlqv
ldshyqdvlkevkaaaskvkanllsveeacsltpphsakskygygakdvrshasravahi
nsvwkdlledsvtpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvv
sklplavmgssygfqyspgqrveflvqawkskktpmgfsydtrcfdstvtesdirteeai
yqccdldpqarvaikslterlyvggpltnsrgencgyrrcrasgvlttscgntltcyika
raacraaglqdctmlvygddlvvicesagvqedaaslrafteamtrysappgdppqpeyd
lelitscssnvsvahdgagkrvyyltrdpttplaraawetarhtpvnswlgniimfaptl
warmilmthffsvliardqleqaldceiygacysiepldlppiiqrlhglsafslhsysp
geinrvaaclrklgvpplrawrhrarsvrarllsrggraaicgkylfnwavrtklkltpi
aaagqlalsgwftagysggdiyhsvsharprlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4khrB (B:)
smsyswtgalvtpcaaeeqklpinalsnsllrhhnlvysttsrsacqrqkkvtfdrlqvl
dshyqdvlkevkaaaskvkanllsveeacsltpphsakskygygakdvrshasravahin
svwkdlledsvtpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvvs
klplavmgssygfqyspgqrveflvqawkskktpmgfsydtrcfdstvtesdirteeaiy
qccdldpqarvaikslterlyvggpltnsrgencgyrrcrasgvlttscgntltcyikar
aacraaglqdctmlvygddlvvicesagvqedaaslrafteamtrysappgdppqpeydl
elitscssnvsvahdgagkrvyyltrdpttplaraawetarhtpvnswlgniimfaptlw
armilmthffsvliardqleqaldceiygacysiepldlppiiqrlhglsafslhsyspg
einrvaaclrklgvpplrawrhrarsvrarllsrggraaicgkylfnwavrtklkltpia
aagqlalsgwftagysggdiyh