PDB entry 4k1f

View 4k1f on RCSB PDB site
Description: Crystal structure of reduced tryparedoxin peroxidase from leishmania major at 2.34 A resolution
Class: oxidoreductase
Keywords: Thioredoxin fold, PEROXIDASE, OXIDOREDUCTASE
Deposited on 2013-04-05, released 2014-04-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-06-10, with a file datestamp of 2015-06-05.
Experiment type: XRAY
Resolution: 2.34 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tryparedoxin peroxidase
    Species: Leishmania major [TaxId:5664]
    Gene: TRYP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4QF76 (Start-198)
      • conflict (103)
      • conflict (110)
      • conflict (180)
      • conflict (182)
    Domains in SCOPe 2.07: d4k1fa_
  • Chain 'B':
    Compound: tryparedoxin peroxidase
    Species: Leishmania major [TaxId:5664]
    Gene: TRYP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4QF76 (Start-198)
      • conflict (103)
      • conflict (110)
      • conflict (180)
      • conflict (182)
    Domains in SCOPe 2.07: d4k1fb_
  • Chain 'C':
    Compound: tryparedoxin peroxidase
    Species: Leishmania major [TaxId:5664]
    Gene: TRYP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4QF76 (Start-198)
      • conflict (103)
      • conflict (110)
      • conflict (180)
      • conflict (182)
    Domains in SCOPe 2.07: d4k1fc_
  • Chain 'D':
    Compound: tryparedoxin peroxidase
    Species: Leishmania major [TaxId:5664]
    Gene: TRYP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4QF76
      • conflict (103)
      • conflict (110)
      • conflict (180)
      • conflict (182)
    Domains in SCOPe 2.07: d4k1fd_
  • Chain 'E':
    Compound: tryparedoxin peroxidase
    Species: Leishmania major [TaxId:5664]
    Gene: TRYP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4QF76
      • conflict (103)
      • conflict (110)
      • conflict (180)
      • conflict (182)
    Domains in SCOPe 2.07: d4k1fe_
  • Heterogens: PGE, CL, PEG, PE8, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4k1fA (A:)
mscgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafs
dsvsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvle
esqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkg
dpgmkpepnasvegyfskq

    Sequence, based on observed residues (ATOM records): (download) 
    >4k1fA (A:)
scgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafsd
svsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvlee
sqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkgd
pgmkpepnasvegyfskq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4k1fB (B:)
mscgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafs
dsvsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvle
esqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkg
dpgmkpepnasvegyfskq

    Sequence, based on observed residues (ATOM records): (download) 
    >4k1fB (B:)
scgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafsd
svsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvlee
sqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkgd
pgmkpepnasvegyfskq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4k1fC (C:)
mscgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafs
dsvsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvle
esqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkg
dpgmkpepnasvegyfskq

    Sequence, based on observed residues (ATOM records): (download) 
    >4k1fC (C:)
scgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafsd
svsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvlee
sqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkgd
pgmkpepnasvegyfskq

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4k1fD (D:)
mscgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafs
dsvsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvle
esqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkg
dpgmkpepnasvegyfskq

    Sequence, based on observed residues (ATOM records): (download) 
    >4k1fD (D:)
cgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafsds
vsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvlees
qgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkgdp
gmkpepnasvegyfsk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4k1fE (E:)
mscgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafs
dsvsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvle
esqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkg
dpgmkpepnasvegyfskq

    Sequence, based on observed residues (ATOM records): (download) 
    >4k1fE (E:)
scgnakinspapsfeevalmpngsfkkislssykgkwvvlffypldftfvcpteviafsd
svsrfnelncevlacsidseyahlqwtlqdrkkgglgtmaipiladktkniarsygvlee
sqgvayrglfiidphgmlrqitvndmpvgrsveevlrlleafqfvekhgevcpanwkkgd
pgmkpepnasvegyfsk