PDB entry 4jkp

View 4jkp on RCSB PDB site
Description: Restricting HIV-1 Pathways for Escape using Rationally-Designed Anti-HIV-1 Antibodies
Class: viral protein/immune system
Keywords: IgG, Antibody, gp120, viral protein-immune system complex
Deposited on 2013-03-11, released 2013-05-15
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-07-24, with a file datestamp of 2013-07-19.
Experiment type: XRAY
Resolution: 2.82 Å
R-factor: 0.195
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'G':
    Compound: gp120
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
    • PDB 4JKP (0-End)
  • Chain 'H':
    Compound: Heavy chain of antibody 45-46M2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4JKP (0-End)
  • Chain 'L':
    Compound: Light chain of antibody 45-46M2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4JKP
    Domains in SCOPe 2.03: d4jkpl1, d4jkpl2
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >4jkpL (L:)
eivltqspatlslspgetaiiscrtsqygslawyqqrpgqaprlviysgstraagipdrf
sgsrwgadynlsisnlesgdfgvyycqqyeffgqgtkvqvdikrtvaapsvfifppsdeq
lksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlska
dyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >4jkpL (L:)
vltqspatlslspgetaiiscrtsqygslawyqqrpgqaprlviysgstraagipdrfsg
srwgadynlsisnlesgdfgvyycqqyeffgqgtkvqvdikrtvaapsvfifppsdeqlk
sgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskady
ekhkvyacevthqglsspvtksfnrge