PDB entry 4j6j

View 4j6j on RCSB PDB site
Description: Crystal structure of calcium2+-free wild-type CD23 lectin domain (crystal form A)
Class: immune system
Keywords: immunoglobulin fold lectin, antibody receptor, immune system
Deposited on 2013-02-11, released 2013-08-28
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-08-28, with a file datestamp of 2013-08-23.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.191
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Low affinity immunoglobulin epsilon Fc receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: CD23A, CLEC4J, FCE2, FCER2, IGEBF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4j6ja_
  • Chain 'B':
    Compound: Low affinity immunoglobulin epsilon Fc receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: CD23A, CLEC4J, FCE2, FCER2, IGEBF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4j6jb_
  • Chain 'C':
    Compound: Low affinity immunoglobulin epsilon Fc receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: CD23A, CLEC4J, FCE2, FCER2, IGEBF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4j6jc_
  • Chain 'D':
    Compound: Low affinity immunoglobulin epsilon Fc receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: CD23A, CLEC4J, FCE2, FCER2, IGEBF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4j6jd_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4j6jA (A:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatctppasegsae

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6jA (A:)
gfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhash
tgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdrk
lgawvcdrlatctpp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4j6jB (B:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatctppasegsae

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6jB (B:)
gfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhash
tgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdrk
lgawvcdrlatctpp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4j6jC (C:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatctppasegsae

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6jC (C:)
gfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhash
tgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdrk
lgawvcdrlatctpp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4j6jD (D:)
sgfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhas
htgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdr
klgawvcdrlatctppasegsae

    Sequence, based on observed residues (ATOM records): (download) 
    >4j6jD (D:)
gfvcntcpekwinfqrkcyyfgkgtkqwvharyacddmegqlvsihspeeqdfltkhash
tgswiglrnldlkgefiwvdgshvdysnwapgeptsrsqgedcvmmrgsgrwndafcdrk
lgawvcdrlatctpp