PDB entry 4i9x

View 4i9x on RCSB PDB site
Description: Crystal structure of human cytomegalovirus glycoprotein UL141 targeting the death receptor TRAIL-R2
Class: apoptosis
Keywords: Ig-like domain, APOPTOSIS
Deposited on 2012-12-05, released 2013-04-03
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-04-17, with a file datestamp of 2013-04-12.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.224
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein UL141
    Species: Human herpesvirus 5 [TaxId:295027]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Protein UL141
    Species: Human herpesvirus 5 [TaxId:295027]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Tumor necrosis factor receptor superfamily member 10B
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4i9xc1, d4i9xc2, d4i9xc3
  • Chain 'D':
    Compound: Tumor necrosis factor receptor superfamily member 10B
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4i9xd1, d4i9xd2, d4i9xd3
  • Heterogens: NAG, CA, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4i9xC (C:)
qqdlapqqraapqqkrsspseglcppghhisedgrdcisckygqdysthwndllfclrct
rcdsgevelspctttrntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdie
cvhkesg

    Sequence, based on observed residues (ATOM records): (download) 
    >4i9xC (C:)
eglcppghhisedgrdcisckygqdysthwndllfclrctrcdsgevelspctttrntvc
qceegtfreedspemcrkcrtgcprgmvkvgdctpwsdiecvhke

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4i9xD (D:)
qqdlapqqraapqqkrsspseglcppghhisedgrdcisckygqdysthwndllfclrct
rcdsgevelspctttrntvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdie
cvhkesg

    Sequence, based on observed residues (ATOM records): (download) 
    >4i9xD (D:)
spseglcppghhisedgrdcisckygqdysthwndllfclrctrcdsgevelspctttrn
tvcqceegtfreedspemcrkcrtgcprgmvkvgdctpwsdiecvhke