PDB entry 4gnp

View 4gnp on RCSB PDB site
Description: Structure of rat cytosolic PEPCK Ld_3g in complex with PEP and GDP
Class: lyase
Keywords: kinase, gluconeogenesis, LYASE
Deposited on 2012-08-17, released 2013-07-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-07-26, with a file datestamp of 2017-07-21.
Experiment type: XRAY
Resolution: 1.74 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P07379 (Start-462)
    • Uniprot P07379 (466-613)
      • linker (463-465)
    Domains in SCOPe 2.07: d4gnpa1, d4gnpa2
  • Heterogens: GDP, MN, PEP, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gnpA (A:)
mppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahm
qeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmsee
dfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsv
lealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsl
lgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptl
pgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnv
aetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpaw
espegvpiegiifggrrpagvplvyealswqhgvfvgaamrsegggimhdpfamrpffgy
nfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgrieged
sakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyei
erelralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >4gnpA (A:)
dfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqeegvirkl
kkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedfekafnar
fpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvlealgdgef
ikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllgkkcfalr
iasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvg
ddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvy
wegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespegvpie
giifggrrpagvplvyealswqhgvfvgaamrsegggimhdpfamrpffgynfgkylahw
lsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpigy
vpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkq
risqm