PDB entry 4aep

View 4aep on RCSB PDB site
Description: hcv-jfh1 ns5b polymerase structure at 1.8 angstrom
Class: transferase
Keywords: transferase, hepacivirus, nonstructural proteins, replication, de novo initiation, priming
Deposited on 2012-01-12, released 2012-05-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2012-07-25, with a file datestamp of 2012-07-20.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.1886
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA-directed RNA polymerase
    Species: HEPATITIS C VIRUS [TaxId:11103]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4aepa_
  • Heterogens: PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4aepA (A:)
masmsyswtgalitpcspeeeklpinplsnsllryhnkvycttsksasqrakkvtfdrtq
vldahydsvlkdiklaaskvsarlltleeacqltpphsarskygfgakevrslsgravnh
iksvwkdlledpqtpipttimaknevfcvdpakggkkparlivypdlgvrvcekmalydi
tqklpqavmgasygfqyspaqrveyllkawaekkdpmgfsydtrcfdstvterdirtees
iyqacslpeeartaihslterlyvggpmfnskgqtcgyrrcrasgvlttsmgntitcyvk
alaackaagivaptmlvcgddlvvisesqgteedernlrafteamtrysappgdpprpey
dlelitscssnvsvalgprgrrryyltrdpttplaraawetvrhspinswlgniiqyapt
iwvrmvlmthffsilmvqdtldqnlnfemygsvysvnpldlpaiierlhgldafsmhtys
hheltrvasalrklgapplrvwksraravraslisrggkaavcgrylfnwavktklkltp
lpearlldlsswftvgagggdifhsvsrarprshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4aepA (A:)
smsyswtgalitpcspeeeklpinplsnsllryhnkvycttsksasqrakkvtfdrtqvl
dahydsvlkdiklaaskvsarlltleeacqltpphsarskygfgakevrslsgravnhik
svwkdlledpqtpipttimaknevfcvdpakggkkparlivypdlgvrvcekmalyditq
klpqavmgasygfqyspaqrveyllkawaekkdpmgfsydtrcfdstvterdirteesiy
qacslpeeartaihslterlyvggpmfnskgqtcgyrrcrasgvlttsmgntitcyvkal
aackaagivaptmlvcgddlvvisesqgteedernlrafteamtrysappgdpprpeydl
elitscssnvsvalgprgrrryyltrdpttplaraawetvrhspinswlgniiqyaptiw
vrmvlmthffsilmvqdtldqnlnfemygsvysvnpldlpaiierlhgldafsmhtyshh
eltrvasalrklgapplrvwksraravraslisrggkaavcgrylfnwavktklkltplp
earlldlsswftvgagggdifhs