PDB entry 3vcr

View 3vcr on RCSB PDB site
Description: Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica
Class: structural genomics, unknown function
Keywords: unknown function, aldolase superfamily, class I aldolase, kdpg aldolase domain, alpha/beta protein, tim beta/alpha barrel, tim barrel, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
Deposited on 2012-01-04, released 2012-01-18
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-08-07, with a file datestamp of 2013-08-02.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: 0.18
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase
    Species: Oleispira antarctica [TaxId:188908]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3vcra_
  • Chain 'B':
    Compound: putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase
    Species: Oleispira antarctica [TaxId:188908]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3vcrb_
  • Heterogens: PYR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vcrA (A:)
gmtqldtwlantkplipvividdlvhaipmakalvaggvhllevtlrteaglaaisaikk
avpeaivgagtvctaddfqkaidagaqfivspgltpeliekakqvkldgqwqgvflpgva
tasevmiaaqagitqlkcfpasaiggakllkawsgpfpdiqfcptggiskdnykeylglp
nvicaggswltesklliegdwnevtrraseivklsdi

    Sequence, based on observed residues (ATOM records): (download) 
    >3vcrA (A:)
mtqldtwlantkplipvividdlvhaipmakalvaggvhllevtlrteaglaaisaikka
vpeaivgagtvctaddfqkaidagaqfivspgltpeliekakqvkldgqwqgvflpgvat
asevmiaaqagitqlkcfpasaiggakllkawsgpfpdiqfcptggiskdnykeylglpn
vicaggswltesklliegdwnevtrraseivklsdi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3vcrB (B:)
gmtqldtwlantkplipvividdlvhaipmakalvaggvhllevtlrteaglaaisaikk
avpeaivgagtvctaddfqkaidagaqfivspgltpeliekakqvkldgqwqgvflpgva
tasevmiaaqagitqlkcfpasaiggakllkawsgpfpdiqfcptggiskdnykeylglp
nvicaggswltesklliegdwnevtrraseivklsdi

    Sequence, based on observed residues (ATOM records): (download) 
    >3vcrB (B:)
mtqldtwlantkplipvividdlvhaipmakalvaggvhllevtlrteaglaaisaikka
vpeaivgagtvctaddfqkaidagaqfivspgltpeliekakqvkldgqwqgvflpgvat
asevmiaaqagitqlkcfpasaiggakllkawsgpfpdiqfcptggiskdnykeylglpn
vicaggswltesklliegdwnevtrraseivklsdi