PDB entry 3q0m

View 3q0m on RCSB PDB site
Description: Crystal structure of the PUMILIO-homology domain from Human PUMILIO1 in complex with p38alpha NREb
Class: RNA binding protein/RNA
Keywords: PUF, PUMILIO-homolgy domain, Gene regulation, RNA binding, RNA binding protein-RNA complex
Deposited on 2010-12-15, released 2011-03-16
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-06-19, with a file datestamp of 2013-06-14.
Experiment type: XRAY
Resolution: 2.71 Å
R-factor: 0.216
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pumilio homolog 1
    Species: Homo sapiens [TaxId:9606]
    Gene: PUM1, KIAA0099, PUMH1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3q0ma_
  • Chain 'B':
    Compound: Pumilio homolog 1
    Species: Homo sapiens [TaxId:9606]
    Gene: PUM1, KIAA0099, PUMH1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3q0mb_
  • Chain 'C':
    Compound: 5'-r(up*gp*up*ap*gp*ap*up*a)-3'
    Species: synthetic, synthetic
  • Chain 'D':
    Compound: 5'-r(up*gp*up*ap*gp*ap*up*a)-3'
    Species: synthetic, synthetic
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3q0mA (A:)
grsrlledfrnnrypnlqlreiaghimefsqdqhgsrfiqlkleratpaerqlvfneilq
aayqlmvdvfgnyviqkffefgsleqklalaerirghvlslalqmygcrviqkalefips
dqqnemvreldghvlkcvkdqngnhvvqkciecvqpqslqfiidafkgqvfalsthpygc
rviqrilehclpdqtlpileelhqhteqlvqdqygnyviqhvlehgrpedkskivaeirg
nvlvlsqhkfasnvvekcvthasrteravlidevctmndgphsalytmmkdqyanyvvqk
midvaepgqrkivmhkirphiatlrkytygkhilaklekyymkngvdlg

    Sequence, based on observed residues (ATOM records): (download) 
    >3q0mA (A:)
rsrlledfrnnrypnlqlreiaghimefsqdqhgsrfiqlkleratpaerqlvfneilqa
ayqlmvdvfgnyviqkffefgsleqklalaerirghvlslalqmygcrviqkalefipsd
qqnemvreldghvlkcvkdqngnhvvqkciecvqpqslqfiidafkgqvfalsthpygcr
viqrilehclpdqtlpileelhqhteqlvqdqygnyviqhvlehgrpedkskivaeirgn
vlvlsqhkfasnvvekcvthasrteravlidevctmndgphsalytmmkdqyanyvvqkm
idvaepgqrkivmhkirphiatlrkytygkhilakle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3q0mB (B:)
grsrlledfrnnrypnlqlreiaghimefsqdqhgsrfiqlkleratpaerqlvfneilq
aayqlmvdvfgnyviqkffefgsleqklalaerirghvlslalqmygcrviqkalefips
dqqnemvreldghvlkcvkdqngnhvvqkciecvqpqslqfiidafkgqvfalsthpygc
rviqrilehclpdqtlpileelhqhteqlvqdqygnyviqhvlehgrpedkskivaeirg
nvlvlsqhkfasnvvekcvthasrteravlidevctmndgphsalytmmkdqyanyvvqk
midvaepgqrkivmhkirphiatlrkytygkhilaklekyymkngvdlg

    Sequence, based on observed residues (ATOM records): (download) 
    >3q0mB (B:)
srlledfrnnrypnlqlreiaghimefsqdqhgsrfiqlkleratpaerqlvfneilqaa
yqlmvdvfgnyviqkffefgsleqklalaerirghvlslalqmygcrviqkalefipsdq
qnemvreldghvlkcvkdqngnhvvqkciecvqpqslqfiidafkgqvfalsthpygcrv
iqrilehclpdqtlpileelhqhteqlvqdqygnyviqhvlehgrpedkskivaeirgnv
lvlsqhkfasnvvekcvthasrteravlidevctmndgphsalytmmkdqyanyvvqkmi
dvaepgqrkivmhkirphiatlrkytygkhilakleky

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.