PDB entry 3kxs

View 3kxs on RCSB PDB site
Description: Crystal structure of HBV capsid mutant dimer (oxy form), strain adyw
Class: viral protein
Keywords: Core protein, capsid, hepadnavirus, four helix bundle, icosahedral, dimer, Capsid protein, DNA-binding, Host cytoplasm, Host-virus interaction, Phosphoprotein, RNA-binding, Virion
Deposited on 2009-12-03, released 2010-02-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2010-02-02, with a file datestamp of 2010-01-29.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.22
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein
    Species: Hepatitis B virus [TaxId:10419]
    Gene: C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (0-End)
      • engineered (131)
    Domains in SCOPe 2.07: d3kxsa_
  • Chain 'B':
    Compound: capsid protein
    Species: Hepatitis B virus [TaxId:10419]
    Gene: C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (0-End)
      • engineered (131)
    Domains in SCOPe 2.07: d3kxsb_
  • Chain 'C':
    Compound: capsid protein
    Species: Hepatitis B virus [TaxId:10419]
    Gene: C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (0-End)
      • engineered (131)
    Domains in SCOPe 2.07: d3kxsc_
  • Chain 'D':
    Compound: capsid protein
    Species: Hepatitis B virus [TaxId:10419]
    Gene: C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (0-End)
      • engineered (131)
    Domains in SCOPe 2.07: d3kxsd_
  • Chain 'E':
    Compound: capsid protein
    Species: Hepatitis B virus [TaxId:10419]
    Gene: C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (0-142)
      • engineered (131)
    Domains in SCOPe 2.07: d3kxse_
  • Chain 'F':
    Compound: capsid protein
    Species: Hepatitis B virus [TaxId:10419]
    Gene: C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03147 (0-End)
      • engineered (131)
    Domains in SCOPe 2.07: d3kxsf_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3kxsA (A:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilstl

    Sequence, based on observed residues (ATOM records): (download) 
    >3kxsA (A:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapil

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3kxsB (B:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilstl

    Sequence, based on observed residues (ATOM records): (download) 
    >3kxsB (B:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilst

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3kxsC (C:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilstl

    Sequence, based on observed residues (ATOM records): (download) 
    >3kxsC (C:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilst

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3kxsD (D:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilstl

    Sequence, based on observed residues (ATOM records): (download) 
    >3kxsD (D:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapils

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3kxsE (E:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilstl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3kxsF (F:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilstl

    Sequence, based on observed residues (ATOM records): (download) 
    >3kxsF (F:)
mdidpykefgatvellsflpsdffpsvrdlldtaaalyrdalespehcsphhtalrqail
cwgdlmtlatwvgtnledpasrdlvvsyvntnvglkfrqllwfhiscltfgretvleylv
sfgvwirtppaarppnapilst