PDB entry 3du0

View 3du0 on RCSB PDB site
Description: E. coli dihydrodipicolinate synthase with first substrate, pyruvate, bound in active site
Class: lyase
Keywords: alpha/beta barrel, TIM barrel, lyase, Amino-acid biosynthesis, Diaminopimelate biosynthesis, Lysine biosynthesis, Schiff base
Deposited on 2008-07-16, released 2008-11-18
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.191
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dihydrodipicolinate synthase
    Species: Escherichia coli [TaxId:83333]
    Gene: dapA, b2478, JW2463
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3du0a_
  • Chain 'B':
    Compound: Dihydrodipicolinate synthase
    Species: Escherichia coli [TaxId:83333]
    Gene: dapA, b2478, JW2463
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3du0b_
  • Heterogens: K, GOL, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3du0A (A:)
mftgsivaivtpmdekgnvcraslkklidyhvasgtsaivsvgttgesatlnhdehadvv
mmtldladgripviagtganataeaisltqrfndsgivgcltvtpyynrpsqeglyqhfk
aiaehtdlpqilynvpsrtgcdllpetvgrlakvkniigixeatgnltrvnqikelvsdd
fvllsgddasaldfmqlgghgvisvtanvaardmaqmcklaaeghfaearvinqrlmplh
nklfvepnpipvkwackelglvatdtlrlpmtpitdsgretvraalkhagll

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3du0B (B:)
mftgsivaivtpmdekgnvcraslkklidyhvasgtsaivsvgttgesatlnhdehadvv
mmtldladgripviagtganataeaisltqrfndsgivgcltvtpyynrpsqeglyqhfk
aiaehtdlpqilynvpsrtgcdllpetvgrlakvkniigixeatgnltrvnqikelvsdd
fvllsgddasaldfmqlgghgvisvtanvaardmaqmcklaaeghfaearvinqrlmplh
nklfvepnpipvkwackelglvatdtlrlpmtpitdsgretvraalkhagll