PDB entry 3dtb

View 3dtb on RCSB PDB site
Description: The structure of rat cytosolic PEPCK in complex with phosphoglycolate and GDP
Class: lyase
Keywords: kinase, gluconeogenesis, lyase, Decarboxylase, GTP-binding, Nucleotide-binding
Deposited on 2008-07-14, released 2008-08-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: N/A
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3dtba1, d3dtba2
  • Chain 'B':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3dtbb1, d3dtbb2
  • Heterogens: PGA, MN, NA, BCT, GDP, 1PE, EPE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dtbA (A:)
gsmppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrlla
hmqeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwms
eedfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgt
svlealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggn
sllgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnp
tlpgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntift
nvaetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidp
awespegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimhd
pfamrpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvle
wmfgriegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyled
qvnadlpyeierelralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >3dtbA (A:)
pqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqe
egvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedf
ekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvle
algdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllg
kkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpg
wkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvae
tsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawes
pegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimhdpfam
rpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfg
riegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvna
dlpyeierelralkqrisqm

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dtbB (B:)
gsmppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrlla
hmqeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwms
eedfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgt
svlealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggn
sllgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnp
tlpgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntift
nvaetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidp
awespegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimhd
pfamrpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvle
wmfgriegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyled
qvnadlpyeierelralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >3dtbB (B:)
pqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqe
egvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedf
ekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvle
algdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllg
kkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpg
wkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvae
tsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawes
pegvpiegiifggrrpagvplvyealswqhgvfvgaamrseakvimhdpfamrpffgynf
gkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsa
kltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeier
elralkqrisqm