PDB entry 3dnw

View 3dnw on RCSB PDB site
Description: Structure of mdt protein
Class: Transcription/DNA
Keywords: mdt, persistence, DNA-binding, Repressor, Transcription, Transcription regulation, Transcription/DNA COMPLEX
Deposited on 2008-07-02, released 2009-01-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-07-28, with a file datestamp of 2009-07-24.
Experiment type: XRAY
Resolution: 2.98 Å
R-factor: 0.265
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hipA
    Species: Escherichia coli [TaxId:83333]
    Gene: hipA, b1507, JW1500
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23874
      • engineered (308)
    Domains in SCOPe 2.07: d3dnwa_
  • Chain 'B':
    Compound: HTH-type transcriptional regulator hipB
    Species: Escherichia coli [TaxId:83333]
    Gene: hipB, b1508, JW1501
    Database cross-references and differences (RAF-indexed):
  • Chain 'T':
    Compound: DNA (5'-d(*dap*dcp*dtp*dap*dtp*dcp*dcp*dcp*dcp*dtp*dtp*dap*dap*dgp*dgp*dgp*dgp*dap*dtp*dap*dg)-3')
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dnwA (A:)
mpklvtwmnnqrvgeltklangahtfkyapewlasryarplslslplqrgnitsdavfnf
fdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekl
tearleevltaykadiplgmireendfrisvagaqektallrigndwcipkgitptthii
klpigeirqpnatldlsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrw
naertvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqv
fqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnask
gkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvt
avesnvlrlhgrlsreygsk

    Sequence, based on observed residues (ATOM records): (download) 
    >3dnwA (A:)
pklvtwmnnqrvgeltklangahtfkyapewlasryarplslslplqrgnitsdavfnff
dnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimaweklt
earleevltaykadfrisvagaqektallrigndwcipkgitptthiiklpilsqsvdne
yyclllakelglnvpdaeiikagnvralaverfdrrwnaertvllrlpqedmcqtfglps
svkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqagg
syrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrf
pevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey

  • Chain 'B':
    No sequence available.

  • Chain 'T':
    No sequence available.