PDB entry 3dbo

View 3dbo on RCSB PDB site
Description: Crystal structure of a member of the VapBC family of toxin-antitoxin systems, VapBC-5, from Mycobacterium tuberculosis
Deposited on 2008-06-02, released 2008-07-15
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.76 Å
R-factor: 0.214
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized protein
    Species: Mycobacterium tuberculosis [TaxId:83332]
    Gene: Rv0626, MT0654
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Uncharacterized protein
    Species: Mycobacterium tuberculosis [TaxId:83332]
    Gene: Rv0627
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NA, ACT, BME, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3dboA (A:)
mqagpalmsevasrelrndtagvlrrvragedvtitvsgrpvavltpvrprrrrwlskte
flsrlrgaqadpglrndlavlagdttedlgpir

    Sequence, based on observed residues (ATOM records):
    >3dboA (A:)
rrwlskteflsrlrgaqadpglrndlavlagdtt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3dboB (B:)
mahhhhhhvddddkmvsttpaagvldtsvfiatesgrqldealipdrvattvvtlaelrv
gvlaaattdiraqrlatlesvadmetlpvdddaarmwarlrihlaesgrrvrindlwiaa
vaasralpvitqdddfaaldgaasveiirv

    Sequence, based on observed residues (ATOM records):
    >3dboB (B:)
paagvldtsvfiaqldealipdrvattvvtlaelrvgvlaaattdiraqrlatlesvadm
etlpvdddaarmwarlrihlaesgrrvrindlwiaavaasralpvitqdddfaaldgaas
veiirv