PDB entry 3d9g

View 3d9g on RCSB PDB site
Description: Nitroalkane oxidase: wild type crystallized in a trapped state forming a cyanoadduct with FAD
Class: oxidoreductase
Keywords: oxidoreductase, flavoenzyme, nitroalkane, acyl-coa dehydrogenase, long cell edge, fad, inhibitor, flavoprotein
Deposited on 2008-05-27, released 2009-04-07
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.196
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nitroalkane oxidase
    Species: FUSARIUM OXYSPORUM [TaxId:5507]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3d9ga1, d3d9ga2
  • Chain 'B':
    Compound: nitroalkane oxidase
    Species: FUSARIUM OXYSPORUM [TaxId:5507]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3d9gb1, d3d9gb2
  • Chain 'C':
    Compound: nitroalkane oxidase
    Species: FUSARIUM OXYSPORUM [TaxId:5507]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3d9gc1, d3d9gc2
  • Chain 'D':
    Compound: nitroalkane oxidase
    Species: FUSARIUM OXYSPORUM [TaxId:5507]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3d9gd1, d3d9gd2
  • Heterogens: FAD, CNX, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3d9gA (A:)
vdfklspsqlearrhaqafantvltkasaeystqkdqlsrfqatrpfyreavrhglikaq
vpiplggtmeslvhesiileelfavepatsitivatalglmpvilcdspslqekflkpfi
sgegeplaslmhsepngtanwlqkggpglqttarkvgnewvisgeklwpsnsggwdykga
dlacvvcrvsddpskpqdpnvdpatqiavllvtretiannkkdayqilgepelaghitts
gphtrftefhvphenllctpglkaqglvetafamsaalvgamaigtaraafeealvfaks
dtrggskhiiehqsvadklidckirletsrllvwkavttledealewkvklemamqtkiy
ttdvavecvidamkavgmksyakdmsfprllnevmcyplfdggniglrrrqmqrvmaled
yepwaatygsskvdksrl

    Sequence, based on observed residues (ATOM records): (download) 
    >3d9gA (A:)
vdfklspsqlearrhaqafantvltkasaeystqkdqlsrfqatrpfyreavrhglikaq
vpiplggtmeslvhesiileelfavepatsitivatalglmpvilcdspslqekflkpfi
sgegeplaslmhsepngtanwlqkggpglqttarkvgnewvisgeklwpsnsggwdykga
dlacvvcrvsddpskpqdpnvdpatqiavllvtretiannkkdayqilgepelaghitts
gphtrftefhvphenllctpglkaqglvetafamsaalvgamaigtaraafeealvfaks
dtrggskhiiehqsvadklidckirletsrllvwkavttledealewkvklemamqtkiy
ttdvavecvidamkavgmksyakdmsfprllnevmcyplfdggniglrrrqmqrvmaled
yepwaatygs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3d9gB (B:)
vdfklspsqlearrhaqafantvltkasaeystqkdqlsrfqatrpfyreavrhglikaq
vpiplggtmeslvhesiileelfavepatsitivatalglmpvilcdspslqekflkpfi
sgegeplaslmhsepngtanwlqkggpglqttarkvgnewvisgeklwpsnsggwdykga
dlacvvcrvsddpskpqdpnvdpatqiavllvtretiannkkdayqilgepelaghitts
gphtrftefhvphenllctpglkaqglvetafamsaalvgamaigtaraafeealvfaks
dtrggskhiiehqsvadklidckirletsrllvwkavttledealewkvklemamqtkiy
ttdvavecvidamkavgmksyakdmsfprllnevmcyplfdggniglrrrqmqrvmaled
yepwaatygsskvdksrl

    Sequence, based on observed residues (ATOM records): (download) 
    >3d9gB (B:)
vdfklspsqlearrhaqafantvltkasaeystqkdqlsrfqatrpfyreavrhglikaq
vpiplggtmeslvhesiileelfavepatsitivatalglmpvilcdspslqekflkpfi
sgegeplaslmhsepngtanwlqkggpglqttarkvgnewvisgeklwpsnsggwdykga
dlacvvcrvsddpskpqdpnvdpatqiavllvtretiannkkdayqilgepelaghitts
gphtrftefhvphenllctpglkaqglvetafamsaalvgamaigtaraafeealvfaks
dtrggskhiiehqsvadklidckirletsrllvwkavttledealewkvklemamqtkiy
ttdvavecvidamkavgmksyakdmsfprllnevmcyplfdggniglrrrqmqrvmaled
yepwaatygss

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3d9gC (C:)
vdfklspsqlearrhaqafantvltkasaeystqkdqlsrfqatrpfyreavrhglikaq
vpiplggtmeslvhesiileelfavepatsitivatalglmpvilcdspslqekflkpfi
sgegeplaslmhsepngtanwlqkggpglqttarkvgnewvisgeklwpsnsggwdykga
dlacvvcrvsddpskpqdpnvdpatqiavllvtretiannkkdayqilgepelaghitts
gphtrftefhvphenllctpglkaqglvetafamsaalvgamaigtaraafeealvfaks
dtrggskhiiehqsvadklidckirletsrllvwkavttledealewkvklemamqtkiy
ttdvavecvidamkavgmksyakdmsfprllnevmcyplfdggniglrrrqmqrvmaled
yepwaatygsskvdksrl

    Sequence, based on observed residues (ATOM records): (download) 
    >3d9gC (C:)
vdfklspsqlearrhaqafantvltkasaeystqkdqlsrfqatrpfyreavrhglikaq
vpiplggtmeslvhesiileelfavepatsitivatalglmpvilcdspslqekflkpfi
sgegeplaslmhsepngtanwlqkggpglqttarkvgnewvisgeklwpsnsggwdykga
dlacvvcrvsddpskpqdpnvdpatqiavllvtretiannkkdayqilgepelaghitts
gphtrftefhvphenllctpglkaqglvetafamsaalvgamaigtaraafeealvfaks
dtrggskhiiehqsvadklidckirletsrllvwkavttledealewkvklemamqtkiy
ttdvavecvidamkavgmksyakdmsfprllnevmcyplfdggniglrrrqmqrvmaled
yepwaatygs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3d9gD (D:)
vdfklspsqlearrhaqafantvltkasaeystqkdqlsrfqatrpfyreavrhglikaq
vpiplggtmeslvhesiileelfavepatsitivatalglmpvilcdspslqekflkpfi
sgegeplaslmhsepngtanwlqkggpglqttarkvgnewvisgeklwpsnsggwdykga
dlacvvcrvsddpskpqdpnvdpatqiavllvtretiannkkdayqilgepelaghitts
gphtrftefhvphenllctpglkaqglvetafamsaalvgamaigtaraafeealvfaks
dtrggskhiiehqsvadklidckirletsrllvwkavttledealewkvklemamqtkiy
ttdvavecvidamkavgmksyakdmsfprllnevmcyplfdggniglrrrqmqrvmaled
yepwaatygsskvdksrl

    Sequence, based on observed residues (ATOM records): (download) 
    >3d9gD (D:)
vdfklspsqlearrhaqafantvltkasaeystqkdqlsrfqatrpfyreavrhglikaq
vpiplggtmeslvhesiileelfavepatsitivatalglmpvilcdspslqekflkpfi
sgegeplaslmhsepngtanwlqkggpglqttarkvgnewvisgeklwpsnsggwdykga
dlacvvcrvsddpskpqdpnvdpatqiavllvtretiannkkdayqilgepelaghitts
gphtrftefhvphenllctpglkaqglvetafamsaalvgamaigtaraafeealvfaks
dtrggskhiiehqsvadklidckirletsrllvwkavttledealewkvklemamqtkiy
ttdvavecvidamkavgmksyakdmsfprllnevmcyplfdggniglrrrqmqrvmaled
yepwaatygs