PDB entry 3bec

View 3bec on RCSB PDB site
Description: Crystal structure of E. coli penicillin-binding protein 5 in complex with a peptide-mimetic cephalosporin
Class: hydrolase
Keywords: PEPTIDOGLYCAN SYNTHESIS, PENICILLIN-BINDING PROTEIN, DD-CARBOXYPEPTIDASE, HYDROLASE, DESIGNED CEPHALOSPORIN, Cell shape, Cell wall biogenesis/degradation, Inner membrane, Membrane, Protease
Deposited on 2007-11-16, released 2008-08-26
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.193
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: penicillin-binding protein 5
    Species: ESCHERICHIA COLI
    Gene: dacA, pfv
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3beca1, d3beca2
  • Heterogens: GOL, HJ2, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3becA (A:)
ddlniktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamka
gkfketdlvtigndawatgnpvfkgsslmflkpgmqvpvsqlirginlqsgndacvamad
faagsqdafvglmnsyvnalglknthfqtvhgldadgqyssardmaligqalirdvpney
siykekeftfngirqlnrngllwdnslnvdgiktghtdkagynlvasategqmrlisavm
ggrtfkgreaeskklltwgfrffetvnplkvgkefasepvwfgdsdraslgvdkdvylti
prgrmkdlkasyvlnsselhaplqknqvvgtinfqldgktieqrplvvlqeipegnfgdp
vid

    Sequence, based on observed residues (ATOM records): (download) 
    >3becA (A:)
niktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamkagkf
ketdlvtigndawatgnpvfkgsslmflkpgmqvpvsqlirginlqsgndacvamadfaa
gsqdafvglmnsyvnalglknthfqtvhgldadgqyssardmaligqalirdvpneysiy
kekeftfngirqlnrngllwdnslnvdgiktghtdkagynlvasategqmrlisavmggr
tfkgreaeskklltwgfrffetvnplkvgkefasepvwfgdsdraslgvdkdvyltiprg
rmkdlkasyvlnsselhaplqknqvvgtinfqldgktieqrplvvlqeipeg