PDB entry 2z1z

View 2z1z on RCSB PDB site
Description: Crystal structure of LL-Diaminopimelate Aminotransferase from Arabidopsis thaliana complexed with L-malate ion
Class: transferase
Keywords: LL-diaminopimelate aminotransferase, LL-DAP-AT, PLP, Arabidopsis thaliana, lysine biosynthesis, THDPA, LL-DAP, TRANSFERASE
Deposited on 2007-05-16, released 2007-07-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.183
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: LL-diaminopimelate aminotransferase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: AT4g33680
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2z1za_
  • Chain 'B':
    Compound: LL-diaminopimelate aminotransferase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: AT4g33680
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2z1zb_
  • Heterogens: MLT, PLP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2z1zA (A:)
makrvntckcvatpqekieyktkvsrnsnmsklqagylfpeiarrrsahllkypdaqvis
lgigdttepipevitsamakkahelstiegysgygaeqgakplraaiaktfygglgigdd
dvfvsdgakcdisrlqvmfgsnvtiavqdpsypayvdssvimgqtgqfntdvqkygniey
mrctpengffpdlstvgrtdiiffcspnnptgaaatreqltqlvefakkngsiivydsay
amymsddnprsifeipgaeevametasfskyagftgvrlgwtvipkkllysdgfpvakdf
nriictcfngasnisqagalacltpegleamhkvigfykentniiidtftslgydvyggk
napyvwvhfpnqsswdvfaeilekthvvttpgsgfgpggegfvrvsafghrenileacrr
fkqlykhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2z1zA (A:)
eyktkvsrnsnmsklqagylfpeiarrrsahllkypdaqvislgigdttepipevitsam
akkahelstiegysgygaeqgakplraaiaktfygglgigdddvfvsdgakcdisrlqvm
fgsnvtiavqdpsypayvdssvimgqtgqfntdvqkygnieymrctpengffpdlstvgr
tdiiffcspnnptgaaatreqltqlvefakkngsiivydsayamymsddnprsifeipga
eevametasfskyagftgvrlgwtvipkkllysdgfpvakdfnriictcfngasnisqag
alacltpegleamhkvigfykentniiidtftslgydvyggknapyvwvhfpnqsswdvf
aeilekthvvttpgsgfgpggegfvrvsafghrenileacrrfkqlyk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2z1zB (B:)
makrvntckcvatpqekieyktkvsrnsnmsklqagylfpeiarrrsahllkypdaqvis
lgigdttepipevitsamakkahelstiegysgygaeqgakplraaiaktfygglgigdd
dvfvsdgakcdisrlqvmfgsnvtiavqdpsypayvdssvimgqtgqfntdvqkygniey
mrctpengffpdlstvgrtdiiffcspnnptgaaatreqltqlvefakkngsiivydsay
amymsddnprsifeipgaeevametasfskyagftgvrlgwtvipkkllysdgfpvakdf
nriictcfngasnisqagalacltpegleamhkvigfykentniiidtftslgydvyggk
napyvwvhfpnqsswdvfaeilekthvvttpgsgfgpggegfvrvsafghrenileacrr
fkqlykhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2z1zB (B:)
eyktkvsrnsnmsklqagylfpeiarrrsahllkypdaqvislgigdttepipevitsam
akkahelstiegysgygaeqgakplraaiaktfygglgigdddvfvsdgakcdisrlqvm
fgsnvtiavqdpsypayvdssvimgqtgqfntdvqkygnieymrctpengffpdlstvgr
tdiiffcspnnptgaaatreqltqlvefakkngsiivydsayamymsddnprsifeipga
eevametasfskyagftgvrlgwtvipkkllysdgfpvakdfnriictcfngasnisqag
alacltpegleamhkvigfykentniiidtftslgydvyggknapyvwvhfpnqsswdvf
aeilekthvvttpgsgfgpggegfvrvsafghrenileacrrfkqlyk