PDB entry 2ynt

View 2ynt on RCSB PDB site
Description: GIM-1-3Mol native. Crystal structures of Pseudomonas aeruginosa GIM- 1: active site plasticity in metallo-beta-lactamases
Class: hydrolase
Keywords: hydrolase, antibiotic resistance, residue determinants, loop dynamics
Deposited on 2012-10-18, released 2013-07-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-07-24, with a file datestamp of 2013-07-19.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.1644
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: gim-1 protein
    Species: Pseudomonas aeruginosa [TaxId:287]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q704V1 (1-End)
      • expression tag (0)
    Domains in SCOPe 2.07: d2ynta1, d2ynta2
  • Chain 'B':
    Compound: gim-1 protein
    Species: Pseudomonas aeruginosa [TaxId:287]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q704V1
      • conflict (166)
    Domains in SCOPe 2.07: d2yntb_
  • Chain 'C':
    Compound: gim-1 protein
    Species: Pseudomonas aeruginosa [TaxId:287]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2yntc_
  • Heterogens: ZN, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yntA (A:)
sqghkplevikiedgvylhtsfkniegyglvdsnglvvldnnqayiidtpwseedtklll
swatdrgyqvmasisthshedrtagikllnsksiptytseltkkllaregkpvpthyfkd
deftlgnglielyypgaghtednivawlpkskilfggclvrsheweglgyvgdasisswa
dsiknivskkypiqmvvpghgkvgssdildhtidlaesasnklmqptaeasad

    Sequence, based on observed residues (ATOM records): (download) 
    >2yntA (A:)
sqghkplevikiedgvylhtsfkniegyglvdsnglvvldnnqayiidtpwseedtklll
swatdrgyqvmasisthshedrtagikllnsksiptytseltkkllaregkpvpthyfkd
deftlgnglielyypgaghtednivawlpkskilfggclvrsheweglgyvgdasisswa
dsiknivskkypiqmvvpghgkvgssdildhtidlaesasn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yntB (B:)
sqghkplevikiedgvylhtsfkniegyglvdsnglvvldnnqayiidtpwseedtklll
swatdrgyqvmasisthshedrtagikllnsksiptytseltkkllaregkpvpthyfkd
deftlgnglielyypgaghtednivawlpkskilfggclvrshewealgyvgdasisswa
dsiknivskkypiqmvvpghgkvgssdildhtidlaesasnklmqptaeasad

    Sequence, based on observed residues (ATOM records): (download) 
    >2yntB (B:)
hkplevikiedgvylhtsfkniegyglvdsnglvvldnnqayiidtpwseedtklllswa
tdrgyqvmasisthshedrtagikllnsksiptytseltkkllaregkpvpthyfkddef
tlgnglielyypgaghtednivawlpkskilfggclvrshewealgyvgdasisswadsi
knivskkypiqmvvpghgkvgssdildhtidlaesasnk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2yntC (C:)
sqghkplevikiedgvylhtsfkniegyglvdsnglvvldnnqayiidtpwseedtklll
swatdrgyqvmasisthshedrtagikllnsksiptytseltkkllaregkpvpthyfkd
deftlgnglielyypgaghtednivawlpkskilfggclvrsheweglgyvgdasisswa
dsiknivskkypiqmvvpghgkvgssdildhtidlaesasnklmqptaeasad

    Sequence, based on observed residues (ATOM records): (download) 
    >2yntC (C:)
hkplevikiedgvylhtsfkniegyglvdsnglvvldnnqayiidtpwseedtklllswa
tdrgyqvmasisthshedrtagikllnsksiptytseltkkllaregkpvpthyfkddef
tlgnglielyypgaghtednivawlpkskilfggclvrsheweglgyvgdasisswadsi
knivskkypiqmvvpghgkvgssdildhtidlaesasnklm