PDB entry 2xy3

View 2xy3 on RCSB PDB site
Description: structure of the bacillus subtilis prophage dutpase with dupnhpp
Class: hydrolase
Keywords: hydrolase, phe-lid
Deposited on 2010-11-12, released 2011-02-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-03-23, with a file datestamp of 2011-03-18.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.19705
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: spbc2 prophage-derived deoxyuridine 5'-triphosphate nucleotidohydrolase yoss
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2xy3a_
  • Chain 'B':
    Compound: spbc2 prophage-derived deoxyuridine 5'-triphosphate nucleotidohydrolase yoss
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2xy3b_
  • Chain 'C':
    Compound: spbc2 prophage-derived deoxyuridine 5'-triphosphate nucleotidohydrolase yoss
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2xy3c_
  • Chain 'D':
    Compound: spbc2 prophage-derived deoxyuridine 5'-triphosphate nucleotidohydrolase yoss
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2xy3d_
  • Chain 'E':
    Compound: spbc2 prophage-derived deoxyuridine 5'-triphosphate nucleotidohydrolase yoss
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2xy3e_
  • Chain 'F':
    Compound: spbc2 prophage-derived deoxyuridine 5'-triphosphate nucleotidohydrolase yoss
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2xy3f_
  • Heterogens: DUP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2xy3A (A:)
mqikikyldetqtrinkmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvp
rsstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpav
dlievdrlgngdrgghgstgtk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xy3A (A:)
mqikikyldetqtrinmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvpr
sstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpavd
lievdrlg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2xy3B (B:)
mqikikyldetqtrinkmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvp
rsstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpav
dlievdrlgngdrgghgstgtk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xy3B (B:)
mqikikyldetqtrinkmqgdwidlraaedvaikkdefklvplgvamelpegyeahvvpr
sstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpavd
lievdrl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2xy3C (C:)
mqikikyldetqtrinkmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvp
rsstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpav
dlievdrlgngdrgghgstgtk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xy3C (C:)
mqikikyldetqtrinkmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvp
rsstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpav
dlievdrl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2xy3D (D:)
mqikikyldetqtrinkmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvp
rsstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpav
dlievdrlgngdrgghgstgtk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xy3D (D:)
mqikikyldetqtrinkmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvp
rsstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpav
dlievdrlg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2xy3E (E:)
mqikikyldetqtrinkmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvp
rsstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpav
dlievdrlgngdrgghgstgtk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xy3E (E:)
mqikikyldetqtrinkmqgdwidlraaedvaikkdefklvplgvamelpegyeahvvpr
sstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpavd
lievdrlg

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2xy3F (F:)
mqikikyldetqtrinkmeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvp
rsstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpav
dlievdrlgngdrgghgstgtk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xy3F (F:)
mqikikyldetqtrinkeqgdwidlraaedvaikkdefklvplgvamelpegyeahvvpr
sstyknfgviqtnsmgvidesykgdndfwffpayalrdtkikkgdricqfrimkkmpavd
lievdrl