PDB entry 2xxm
View 2xxm on RCSB PDB site
Description: crystal structure of the hiv-1 capsid protein c-terminal domain in complex with a camelid vhh and the cai peptide.
Class: immune system/peptide
Keywords: immune system-peptide complex, capsid inhibitor, protein binding, protein interface, virus assembly
Deposited on
2010-11-10, released
2011-10-12
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-10-12, with a file datestamp of
2011-10-07.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.1935
AEROSPACI score: 0.56
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: capsid protein p24
Species: HUMAN IMMUNODEFICIENCY VIRUS [TaxId:12721]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: camelid vhh 9
Species: VICUGNA PACOS [TaxId:30538]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2xxmb1, d2xxmb2 - Chain 'T':
Compound: inhibitor of capsid assembly
Species: synthetic construct, synthetic [TaxId:32630]
Database cross-references and differences (RAF-indexed):
- Heterogens: ACT, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2xxmB (B:)
maqvqlvesggglvqaggslrlscaasgsffmsnvmawyrqapgkareliaairggdmst
vyddsvkgrftitrdddknilylqmndlkpedtamyyckasgsswgqgtqvtvsshhhhh
h
Sequence, based on observed residues (ATOM records): (download)
>2xxmB (B:)
lvesggglvqaggslrlscaasgsffmsnvmawyrqapgkareliaairggdmstvydds
vkgrftitrdddknilylqmndlkpedtamyyckasgsswgqgtqvtvss
- Chain 'T':
No sequence available.