PDB entry 2w41

View 2w41 on RCSB PDB site
Description: crystal structure of plasmodium falciparum glycerol kinase with ADP
Class: transferase
Keywords: closed conformation, kinase, malaria, plasmodium, transferase, sugar kinase/hsp70/actin superfamily, glycerol kinase, open conformation
Deposited on 2008-11-18, released 2008-12-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-03, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.41 Å
R-factor: 0.2
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycerol kinase, putative
    Species: PLASMODIUM FALCIPARUM [TaxId:36329]
    Database cross-references and differences (RAF-indexed):
    • PDB 2W41 (Start-5)
    • Uniprot Q8IDI4 (6-506)
    Domains in SCOPe 2.08: d2w41a1, d2w41a2, d2w41a3
  • Chain 'B':
    Compound: glycerol kinase, putative
    Species: PLASMODIUM FALCIPARUM [TaxId:36329]
    Database cross-references and differences (RAF-indexed):
    • PDB 2W41 (0-5)
    • Uniprot Q8IDI4 (6-506)
    Domains in SCOPe 2.08: d2w41b1, d2w41b2, d2w41b3
  • Heterogens: ADP, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2w41A (A:)
isefgsmnvilsidqstqstkvffydeelnivhsnnlnheqkclkpgwyehdpieimtnl
ynlmnegikvlkdkytsviikcigitnqretviiwdritgkplynaivwldtrveelvte
fsakynnndiqkktgtyfntyfsafkilwliqnnpeikqkiddgtavignintwlifnlt
kgncytdvtnasrtllmdintlqwdekmckifnitnmsvlpeiksncsnfglvksehvpd
ylnipitgcigdqqsacigqaifdegeakctygtgvfllintgekvvystcglitticyk
fndndkpkyalegsigtagsgvswllknkliddpseasdimekcenttgvifvpafsgly
aprwrsdarasiygmtfntershivrallegiafqlneivdsltsdmgiemlhvlrcdgg
mtknkpfmqfnsdiintkievskykevtslgaavlaglevkiwdsldsvksllrrsdavf
hskmddkkrkkktsewnkavertliql

    Sequence, based on observed residues (ATOM records): (download) 
    >2w41A (A:)
sefgsmnvilsidqstqstkvffydeelnivhsnnlnheqkclkpgwyehdpieimtnly
nlmnegikvlkdkytsviikcigitnqretviiwdritgkplynaivwldtrveelvtef
sakynnndiqkktgtyfntyfsafkilwliqnnpeikqkiddgtavignintwlifnltk
gncytdvtnasrtllmdintlqwdekmckifnitnmsvlpeiksncsnfglvksehvpdy
lnipitgcigdqqsacigqaifdegeakctygtgvfllintgekvvystcglitticykf
ndndkpkyalegsigtagsgvswllknkliddpseasdimekcenttgvifvpafsglya
prwrsdarasiygmtfntershivrallegiafqlneivdsltsdmgiemlhvlrcdggm
tknkpfmqfnsdiintkievskykevtslgaavlaglevkiwdsldsvksllrrsdavfh
skmddkkrkkktsewnkavertliql

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2w41B (B:)
isefgsmnvilsidqstqstkvffydeelnivhsnnlnheqkclkpgwyehdpieimtnl
ynlmnegikvlkdkytsviikcigitnqretviiwdritgkplynaivwldtrveelvte
fsakynnndiqkktgtyfntyfsafkilwliqnnpeikqkiddgtavignintwlifnlt
kgncytdvtnasrtllmdintlqwdekmckifnitnmsvlpeiksncsnfglvksehvpd
ylnipitgcigdqqsacigqaifdegeakctygtgvfllintgekvvystcglitticyk
fndndkpkyalegsigtagsgvswllknkliddpseasdimekcenttgvifvpafsgly
aprwrsdarasiygmtfntershivrallegiafqlneivdsltsdmgiemlhvlrcdgg
mtknkpfmqfnsdiintkievskykevtslgaavlaglevkiwdsldsvksllrrsdavf
hskmddkkrkkktsewnkavertliql