PDB entry 2vsx
View 2vsx on RCSB PDB site
Description: crystal structure of a translation initiation complex
Class: translation/hydrolase
Keywords: acetylation, ATP-binding, phosphoprotein, protein biosynthesis, translation regulation, translation initiation, translation/hydrolase, initiation factor, nucleotide-binding, helicase, hydrolase, cytoplasm, RNA-binding
Deposited on
2008-04-30, released
2008-06-24
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.2535
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ATP-dependent RNA helicase eif4a
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2vsxa1, d2vsxa2 - Chain 'B':
Compound: ATP-dependent RNA helicase eif4a
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2vsxb1, d2vsxb2 - Chain 'E':
Compound: Eukaryotic initiation factor 4F subunit p150
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: Eukaryotic initiation factor 4F subunit p150
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
- Heterogens: AMP
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2vsxA (A:)
msegitdieesqiqtnydkvvykfddmeldenllrgvfgygfeepsaiqqraimpiiegh
dvlaqaqsgtgktgtfsiaalqridtsvkapqalmlaptrelalqiqkvvmalafhmdik
vhaciggtsfvedaeglrdaqivvgtpgrvfdniqrrrfrtdkikmfildeademlssgf
keqiyqiftllppttqvvllsatmpndvlevttkfmrnpvrilvkkdeltlegikqfyvn
veeeeykyecltdlydsisvtqavifcntrrkveelttklrndkftvsaiysdlpqqerd
timkefrsgssrilistdllargidvqqvslvinydlpankenyihrigrggrfgrkgva
infvtnedvgamrelekfystqieelpsdiatlln
Sequence, based on observed residues (ATOM records): (download)
>2vsxA (A:)
qiqtnydkvvykfddmeldenllrgvfgygfeepsaiqqraimpiieghdvlaqaqsgtg
ktgtfsiaalqridtsvkapqalmlaptrelalqiqkvvmalafhmdikvhaciglrdaq
ivvgtpgrvfdniqrrrfrtdkikmfildeademlssgfkeqiyqiftllppttqvvlls
atmpndvlevttkfmrnpvrilvkkdeltlegikqfyvnveeeeykyecltdlydsisvt
qavifcntrrkveelttklrndkftvsaiysdlpqqerdtimkefrsgssrilistdlla
rgidvqqvslvinydlpankenyihrigrkgvainfvtnedvgamrelekfystqieelp
sdiatl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2vsxB (B:)
msegitdieesqiqtnydkvvykfddmeldenllrgvfgygfeepsaiqqraimpiiegh
dvlaqaqsgtgktgtfsiaalqridtsvkapqalmlaptrelalqiqkvvmalafhmdik
vhaciggtsfvedaeglrdaqivvgtpgrvfdniqrrrfrtdkikmfildeademlssgf
keqiyqiftllppttqvvllsatmpndvlevttkfmrnpvrilvkkdeltlegikqfyvn
veeeeykyecltdlydsisvtqavifcntrrkveelttklrndkftvsaiysdlpqqerd
timkefrsgssrilistdllargidvqqvslvinydlpankenyihrigrggrfgrkgva
infvtnedvgamrelekfystqieelpsdiatlln
Sequence, based on observed residues (ATOM records): (download)
>2vsxB (B:)
qiqtnydkvvykfddmeldenllrgvfgygfeepsaiqqraimpiieghdvlaqaqsgtg
ktgtfsiaalqridtsvkapqalmlaptrelalqiqkvvmalafhmdikvhaciglrdaq
ivvgtpgrvfdniqrrrfrtdkikmfildeademlssgfkeqiyqiftllppttqvvlls
atmpndvlevttkfmrnpvrilvkkdeltlegikqfyvnveeeeykyecltdlydsisvt
qavifcntrrkveelttklrndkftvsaiysdlpqqerdtimkefrsgssrilistdlla
rgidvqqvslvinydlpankenyihrigrkgvainfvtnedvgamrelekfystqieelp
sdiatl
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.