PDB entry 2gws
View 2gws on RCSB PDB site
Description: Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminus
Class: Transferase/DNA
Keywords: DNA polymerase lambda, family X, mismatch extension, mutagenesis, NHEJ, Transferase-DNA COMPLEX
Deposited on
2006-05-05, released
2006-09-05
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-10-18, with a file datestamp of
2017-10-13.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase lambda
Species: Homo sapiens [TaxId:9606]
Gene: POLL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2gwsa1, d2gwsa2, d2gwsa3 - Chain 'D':
Compound: 5'-d(p*gp*cp*cp*g)-3'
- Chain 'E':
Compound: DNA polymerase lambda
Species: Homo sapiens [TaxId:9606]
Gene: POLL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2gwse1, d2gwse2, d2gwse3 - Chain 'F':
Compound: 5'-d(*cp*gp*gp*cp*ap*gp*cp*gp*cp*ap*c)-3'
- Chain 'G':
Compound: 5'-d(*gp*tp*gp*cp*gp*g)-3'
- Chain 'H':
Compound: 5'-d(p*gp*cp*cp*g)-3'
- Chain 'I':
Compound: DNA polymerase lambda
Species: Homo sapiens [TaxId:9606]
Gene: POLL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2gwsi1, d2gwsi2, d2gwsi3 - Chain 'J':
Compound: 5'-d(*cp*gp*gp*cp*ap*gp*cp*gp*cp*ap*c)-3'
- Chain 'K':
Compound: 5'-d(*gp*tp*gp*cp*gp*g)-3'
- Chain 'L':
Compound: 5'-d(p*gp*cp*cp*g)-3'
- Chain 'M':
Compound: DNA polymerase lambda
Species: Homo sapiens [TaxId:9606]
Gene: POLL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2gwsm1, d2gwsm2, d2gwsm3 - Chain 'N':
Compound: 5'-d(*cp*gp*gp*cp*ap*gp*cp*gp*cp*ap*c)-3'
- Chain 'P':
Compound: 5'-d(*gp*tp*gp*cp*gp*g)-3'
- Chain 'Q':
Compound: 5'-d(p*gp*cp*cp*g)-3'
- Chain 'R':
Compound: 5'-d(*gp*tp*gp*cp*gp*g)-3'
- Chain 'T':
Compound: 5'-d(*cp*gp*gp*cp*ap*gp*cp*gp*cp*ap*c)-3'
- Heterogens: NA, CAC, MG, EDO, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2gwsA (A:)
maqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeac
sipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsl
edirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrr
gkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlp
gpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnt
hgckvgpgrvlptptekdvfrllglpyrepaerdw
Sequence, based on observed residues (ATOM records): (download)
>2gwsA (A:)
atnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkr
maekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqas
lttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdv
dvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrr
ldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpg
rvlptptekdvfrllglpyrepaerdw
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2gwsE (E:)
maqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeac
sipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsl
edirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrr
gkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlp
gpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnt
hgckvgpgrvlptptekdvfrllglpyrepaerdw
Sequence, based on observed residues (ATOM records): (download)
>2gwsE (E:)
tnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrm
aekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqasl
ttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvd
vlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrl
diivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgr
vlptptekdvfrllglpyrepaerdw
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence, based on SEQRES records: (download)
>2gwsI (I:)
maqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeac
sipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsl
edirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrr
gkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlp
gpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnt
hgckvgpgrvlptptekdvfrllglpyrepaerdw
Sequence, based on observed residues (ATOM records): (download)
>2gwsI (I:)
tnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrm
aekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqasl
ttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvd
vlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrl
diivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgr
vlptptekdvfrllglpyrepaerdw
- Chain 'J':
No sequence available.
- Chain 'K':
No sequence available.
- Chain 'L':
No sequence available.
- Chain 'M':
Sequence, based on SEQRES records: (download)
>2gwsM (M:)
maqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeac
sipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsl
edirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrr
gkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlp
gpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnt
hgckvgpgrvlptptekdvfrllglpyrepaerdw
Sequence, based on observed residues (ATOM records): (download)
>2gwsM (M:)
tnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrm
aekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqasl
ttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvd
vlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrl
diivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgr
vlptptekdvfrllglpyrepaerdw
- Chain 'N':
No sequence available.
- Chain 'P':
No sequence available.
- Chain 'Q':
No sequence available.
- Chain 'R':
No sequence available.
- Chain 'T':
No sequence available.