PDB entry 2dyj

View 2dyj on RCSB PDB site
Description: Crystal structure of ribosome-binding factor A from Thermus thermophilus HB8
Class: ribosomal protein
Keywords: 16S rRNA processing, 17S RNA, KH domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RIBOSOMAL PROTEIN
Deposited on 2006-09-14, released 2007-03-14
The last revision prior to the SCOP 1.75 freeze date was dated 2008-03-18, with a file datestamp of 2008-03-14.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: 0.199
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribosome-binding factor a
    Species: Thermus thermophilus
    Gene: TTHA0907
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2dyja1
  • Chain 'B':
    Compound: ribosome-binding factor a
    Species: Thermus thermophilus
    Gene: TTHA0907
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2dyjb1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2dyjA (A:)
maygkahleaqlkralaeeiqaledprlflltveavrlskdgsvlsvyveafreeegalr
alsraerrlvaalarrvrmrrlprleflpwraspa

    Sequence, based on observed residues (ATOM records): (download) 
    >2dyjA (A:)
gkahleaqlkralaeeiqaledprlflltveavrlskdgsvlsvyveafreeegalrals
raerrlvaalarrvrmrrlprleflpwrasp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2dyjB (B:)
maygkahleaqlkralaeeiqaledprlflltveavrlskdgsvlsvyveafreeegalr
alsraerrlvaalarrvrmrrlprleflpwraspa

    Sequence, based on observed residues (ATOM records): (download) 
    >2dyjB (B:)
ygkahleaqlkralaeeiqaledprlflltveavrlskdgsvlsvyveafreeegalral
sraerrlvaalarrvrmrrlprleflpwra